CAZyme Information: ASPSYDRAFT_53249-t33_1-p1

Basic Information

• Species: Aspergillus sydowii
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus sydowii
• CAZyme ID: ASPSYDRAFT_53249-t33_1-p1
• CAZy Family: GH43
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1107		119825.18	4.6845

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AsydowiiCBS593.65	13717	1036612	138	13579

• Gene Location: location=KV878582:919870-928241(+)

Full Sequence      

MKYILSLALSATLATAQSISGSAEGFASGVTGGGDATPVYPSDTAELESLLSGDGSQVIV
LTKTYDFTGTTATGTACYSWGEGEGCQAILQDDCGSDPSTVATYDAAGPTPIPVSSEKTL
LGQGEGAIKGKGLSFTDGTSNVIVQNIKITDLNPAYVWGGDALTFDGSSSIWIDHVETSL
IGRVHYVFGYEANSQITLSNNFLNGETTYSTGCDGYQYWGMELVGADDSITFKNNYLYKT
SGRAPALSGTTKFHACNNVWSDNNGHAIEGNEQGQGLFEGNVFTDVTNIADDTTWEAGSL
FLSSADGSGNDACSSYIGRDCASSIYTNSGGGEGYTDASFLSDWADLTIAECSAGPSGLA
MAKTLLQNFPPGTFSPVVFEKKRRIGGLWAVDYPCIPGSTSASAAGLPSSAYRPRGFVDP
WMKTNLSRFSVAFSDLSWETALGREEGDVPVFPCAWEVRRYLEKYVEVYIPRECLGLGRR
VLNVMRRETKNTRDRMGWRVSWTDDEDCHFGTPSIPNIPGLDSSPRIVHSSNLQSPDDIR
SLLGSSPKGKLVVIGGSMSGVEAASSLALHISFLNFRPDSAAQAGRDYEVWHVGSGPFWV
LPTYLPHQYAGDSSERESTKSIPFVPLDLSLYDLGRRPQGMNEFVFGPVSPEQISKRNQF
FRDMLGNNYGRFGGINITDGQGEEDERPPWVGIADYYTEYIRSGAIKTVRGRAYSVACPH
PEKGTTINIQTPTGMTTLTDVAAIVVATGFKPSDSLSFLPQDILSTLEYSKDHFLPLILD
SWSSAHSDIPNLGFVGFYRGAFWGPAELQAQNLAQTWAKIDLESADPVSLPAEEQLSRAA
EREKVREFRDFKPAALRGQFPLGDYVGLMGSLAQRVNRARIPIEIGGGRGGDVQPAGPVV
PARYPPDFMGRDTRLKYTSQEVDITMKALNGTISADPSQGCVGTTAAVFRALHGQWSFER
VQTRVDGDGVVSGQTTFHPRYPSSSDYGAEYLCEEINDDSKTSYSVYRLCGTSRHPKQAG
ISVWSVEEISPNAAGKLVSELHVSPVGKVLDSGEILVQAQGADETQTHIYEFYFDRVAIT
RWSHRVCPREGDAVNRYTTQYSRPADA

Enzyme Prediction     

EC	4.2.2.10:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	103	284	4.7e-75	0.9786096256684492

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
214765	Amb_all	6.09e-45	101	286	3	189	Amb_all domain.
224983	CzcO	7.49e-16	354	804	16	392	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism].
226384	PelB	1.64e-13	21	332	32	342	Pectate lyase [Carbohydrate transport and metabolism].
366158	Pec_lyase_C	2.16e-12	110	283	28	211	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
215116	PLN02172	9.45e-10	349	600	13	254	flavin-containing monooxygenase FMO GS-OX

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
EAA66229.1|PL1_4	0.0	2	1106	17	1186
BCS25934.1|PL1_4	2.92e-238	1	353	1	353
BAE60628.1|PL1_4	5.51e-125	11	354	15	358
QMW30901.1|PL1_4	5.51e-125	11	354	15	358
QRD89806.1|PL1_4	5.51e-125	11	354	15	358

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1IDK_A	1.12e-93	19	354	3	342	Pectin Lyase A [Aspergillus niger]
1IDJ_A	1.55e-92	19	354	3	342	Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
1QCX_A	1.08e-89	19	372	3	358	Pectin Lyase B [Aspergillus niger]
1AIR_A	3.77e-08	139	288	110	262	Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
2EWE_A	8.82e-08	139	288	110	262	Chain A, Pectate lyase C [Dickeya chrysanthemi]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q5BEB9|PELC_EMENI	4.98e-197	2	353	3	356	Probable pectin lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelC PE=3 SV=2
sp|B8N6W5|PELA_ASPFN	9.79e-126	11	354	15	358	Probable pectin lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelA PE=3 SV=1
sp|Q2UCT7|PELC_ASPOR	9.79e-126	11	354	15	358	Probable pectin lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelC PE=3 SV=1
sp|Q5MBK3|PELC_ASPNG	2.93e-111	7	360	9	362	Probable pectin lyase C OS=Aspergillus niger OX=5061 GN=pelC PE=3 SV=1
sp|A2QW65|PELC_ASPNC	3.47e-111	7	360	9	362	Probable pectin lyase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000237	0.999748	CS pos: 16-17. Pr: 0.9759

TMHMM  Annotations     

There is no transmembrane helices in ASPSYDRAFT_53249-t33_1-p1.