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CAZyme Information: ASPSYDRAFT_157480-t33_1-p1

You are here: Home > Sequence: ASPSYDRAFT_157480-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus sydowii
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus sydowii
CAZyme ID ASPSYDRAFT_157480-t33_1-p1
CAZy Family CE1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
399 KV878591|CGC9 41273.11 3.8510
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AsydowiiCBS593.65 13717 1036612 138 13579
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:14 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 71 388 1.7e-69 0.9292307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 8.08e-113 73 398 1 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 3.58e-26 43 392 65 417
polygalacturonase ADPG
227721 Pgu1 1.77e-21 112 320 185 398
Polygalacturonase [Carbohydrate transport and metabolism].
215426 PLN02793 3.39e-21 218 389 226 400
Probable polygalacturonase
215540 PLN03010 8.73e-21 121 389 128 380
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.56e-263 1 399 1 406
1.30e-216 40 399 151 514
6.95e-207 33 399 9 368
2.12e-205 11 399 117 492
2.12e-205 11 399 117 492

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.20e-147 58 399 3 348
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
6.44e-97 58 387 11 330
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
6.44e-97 58 387 11 330
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.27e-95 58 387 3 322
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
5.38e-88 57 397 2 333
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.30e-217 40 399 151 514
Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1
1.32e-206 11 399 117 492
Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2
3.76e-206 11 399 117 492
Probable endopolygalacturonase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaD PE=3 SV=1
2.81e-196 20 398 89 469
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1
7.06e-188 45 399 141 495
Endopolygalacturonase D OS=Aspergillus niger OX=5061 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.011510 0.988465 CS pos: 16-17. Pr: 0.9583

TMHMM  Annotations      help

There is no transmembrane helices in ASPSYDRAFT_157480-t33_1-p1.