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CAZyme Information: ASPNIDRAFT2_1178374-t41_1-p1

You are here: Home > Sequence: ASPNIDRAFT2_1178374-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID ASPNIDRAFT2_1178374-t41_1-p1
CAZy Family GH76
CAZyme Description Glycoside Hydrolase Family 28 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
434 ACJE01000019.1|CGC10 47026.73 4.3985
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerATCC1015 11910 380704 6 11904
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 69 425 1.5e-73 0.9753846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 6.25e-37 118 422 33 314
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 2.23e-29 144 431 144 398
polygalacturonase
215426 PLN02793 2.55e-27 144 420 148 406
Probable polygalacturonase
215120 PLN02188 1.58e-26 208 422 191 389
polygalacturonase/glycoside hydrolase family protein
178580 PLN03003 9.36e-25 144 415 118 364
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 434 1 434
0.0 1 434 1 434
1.20e-153 26 433 30 439
1.47e-149 26 433 30 439
2.36e-149 26 433 44 453

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.89e-67 59 421 29 373
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
7.17e-21 54 420 29 350
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
1.33e-19 64 350 10 278
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
3.86e-19 68 378 11 291
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]
4.00e-19 64 423 11 333
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 434 1 434
Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxA PE=3 SV=1
0.0 1 434 1 434
Exopolygalacturonase A OS=Aspergillus niger OX=5061 GN=pgxA PE=3 SV=1
7.95e-132 36 422 43 426
Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1
1.47e-131 40 408 40 406
Probable exopolygalacturonase X OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaX PE=3 SV=1
6.13e-131 51 433 50 431
Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000337 0.999646 CS pos: 19-20. Pr: 0.9671

TMHMM  Annotations      help

There is no transmembrane helices in ASPNIDRAFT2_1178374-t41_1-p1.