You are browsing environment: FUNGIDB
CAZyme Information: ASPNIDRAFT2_1142822-t41_1-p1
You are here: Home > Sequence: ASPNIDRAFT2_1142822-t41_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus niger | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger | |||||||||||
| CAZyme ID | ASPNIDRAFT2_1142822-t41_1-p1 | |||||||||||
| CAZy Family | GH172 | |||||||||||
| CAZyme Description | Glycoside Hydrolase Family 28 protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 58 | 374 | 1.8e-74 | 0.9753846153846154 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.65e-128 | 63 | 378 | 3 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 7.35e-25 | 97 | 335 | 183 | 456 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 2.97e-24 | 120 | 367 | 120 | 364 | Probable polygalacturonase At3g15720 |
| 215540 | PLN03010 | 1.57e-22 | 101 | 377 | 124 | 394 | polygalacturonase |
| 165802 | PLN02155 | 2.60e-21 | 120 | 371 | 121 | 377 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.61e-271 | 1 | 378 | 1 | 378 | |
| 2.19e-269 | 1 | 378 | 1 | 378 | |
| 2.99e-267 | 1 | 378 | 1 | 378 | |
| 2.99e-267 | 1 | 378 | 1 | 378 | |
| 1.17e-201 | 1 | 378 | 1 | 382 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.70e-188 | 40 | 378 | 1 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
|
| 2.10e-160 | 36 | 378 | 5 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.21e-159 | 36 | 378 | 5 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.06e-158 | 42 | 378 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 5.36e-142 | 41 | 378 | 1 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.86e-272 | 1 | 378 | 1 | 378 | Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1 |
|
| 3.90e-270 | 1 | 378 | 1 | 378 | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1 |
|
| 9.30e-199 | 1 | 378 | 1 | 382 | Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1 |
|
| 3.64e-198 | 11 | 378 | 10 | 381 | Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1 |
|
| 9.59e-195 | 8 | 378 | 9 | 378 | Endopolygalacturonase I OS=Aspergillus aculeatus OX=5053 GN=pgaI PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000277 | 0.999702 | CS pos: 19-20. Pr: 0.9575 |