dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: ASPNIDRAFT2_1101058-t41_1-p1

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Basic Information help

Species

Aspergillus niger

Lineage

Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger

CAZyme ID

ASPNIDRAFT2_1101058-t41_1-p1

CAZy Family

AA7

CAZyme Description

endo-1,4-xylanase xynB-aspergillus niger

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
225	ACJE01000004.1\|CGC1	24057.16	5.1042

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AnigerATCC1015	11910	380704	6	11904

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.8:67

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH11	47	223	5.9e-77	0.9943502824858758

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395367	Glyco_hydro_11	4.63e-109	47	221	1	175	Glycosyl hydrolases family 11.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
2.07e-163	1	225	1	225
2.07e-163	1	225	1	225
2.07e-163	1	225	1	225
2.07e-163	1	225	1	225
2.07e-163	1	225	1	225

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
1.25e-95	39	224	4	189	Crystal structure of family 11 xylanase in complex with inhibitor (XIP-I) [Talaromyces funiculosus]
1.82e-94	34	224	14	206	Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) [Talaromyces funiculosus],3WP3_B Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) [Talaromyces funiculosus]
2.63e-90	39	224	4	189	Chain A, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_B Chain B, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_C Chain C, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_D Chain D, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_E Chain E, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_F Chain F, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_G Chain G, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_H Chain H, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_I Chain I, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_J Chain J, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_K Chain K, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_L Chain L, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612]
1.68e-89	39	224	6	192	High resolution structure of GH11 xylanase from Nectria haematococca [Fusarium vanettenii 77-13-4]
3.18e-88	39	224	28	214	Crystal structure of environmental isolated GH11 in complex with xylobiose and feruloyl-arabino-xylotriose [Escherichia coli]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
3.69e-164	1	225	1	225	Probable endo-1,4-beta-xylanase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xlnB PE=3 SV=1
3.69e-164	1	225	1	225	Endo-1,4-beta-xylanase B OS=Aspergillus niger OX=5061 GN=xlnB PE=1 SV=1
2.68e-157	1	225	1	225	Endo-1,4-beta-xylanase B OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=xlnB PE=3 SV=2
7.13e-120	9	224	11	230	Probable endo-1,4-beta-xylanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnA PE=3 SV=1
3.00e-119	5	224	6	231	Endo-1,4-beta-xylanase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xlnA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000406	0.999553	CS pos: 27-28. Pr: 0.7243

TMHMM Annotations help

There is no transmembrane helices in ASPNIDRAFT2_1101058-t41_1-p1.