CAZyme Information: ASPFODRAFT_78219-t33_1-p1

Basic Information

• Species: Aspergillus luchuensis
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
• CAZyme ID: ASPFODRAFT_78219-t33_1-p1
• CAZy Family: GT58
• CAZyme Description: glycoside hydrolase family 28 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
450		48217.24	3.8838

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AluchuensisCBS106.47	13784	1137211	282	13502

• Gene Location: location=KV878237:2841440-2842964(-)

Full Sequence      

MTLSTSFLVATYLLSLTDSVRAQLTGSVGPLTSVSDKAAVKTCNVLDYGASSDNTTDVGQ
PIIDAFADCGSGGLIYVPEGDYLLKNWVSLENGSAWAIQLDGVLYRDSSPSSQSYMFEIS
GGIDFELFSSNATGAIQGSGYLYHRDDTYTGPRMLHISDVSDWSVHDLVLVDSPMFHFVI
DGGYNGEVYNMAIRGADHGGLDGIDVYGDNMWIHDIMVTNKDECVTTKTNSHNFLIENIY
CNSSGGCAIGSLGSGANVSNIVYRNVYTWDSNQMMMIKSNGGSGDVSNVVLENFIGHGNA
YSLDLDSYWSSMDAIDGDGINYHNITFQNWTGTAVDGETRPPIRVICPEDTPCTEINLVQ
IDLWVEEGAYDEYVCKNAYGSGYCLDSATGTTTPYTTTTYVNSAPTGYEAPTMTDDLTTA
FGTSASIPIPTIPASFFPGVAPISALAGSS

Enzyme Prediction     

EC	3.2.1.171:11

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	68	379	6.1e-54	0.96

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
215540	PLN03010	5.42e-19	44	380	48	391	polygalacturonase
177865	PLN02218	2.08e-15	13	378	51	418	polygalacturonase ADPG
215426	PLN02793	5.69e-15	134	381	151	412	Probable polygalacturonase
395231	Glyco_hydro_28	2.42e-13	152	378	85	315	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
165802	PLN02155	3.44e-11	44	380	29	380	polygalacturonase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS16489.1|GH28	0.0	1	450	1	450
BCS04927.1|GH28	0.0	1	450	1	450
ABD67156.1|GH28	1.27e-317	1	450	1	450
ABD67158.1|GH28	2.21e-271	1	450	1	450
QMW44915.1|GH28	5.12e-242	4	450	3	449

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RMG_A	1.00e-193	23	448	1	422	Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q1ZZM3|RHGE_ASPNG	2.26e-318	1	450	1	450	Probable rhamnogalacturonase E OS=Aspergillus niger OX=5061 GN=rhgE PE=3 SV=1
sp|A2QXE8|RHGE_ASPNC	1.65e-268	1	450	1	448	Probable rhamnogalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgE PE=3 SV=2
sp|B8NKB9|RHGE_ASPFN	1.50e-241	4	450	3	449	Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2
sp|Q2U7A4|RHGE_ASPOR	3.77e-226	4	450	3	432	Probable rhamnogalacturonase E OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgE PE=3 SV=1
sp|Q00001|RHGA_ASPAC	6.92e-193	20	448	16	440	Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000269	0.999705	CS pos: 22-23. Pr: 0.9650

TMHMM  Annotations     

There is no transmembrane helices in ASPFODRAFT_78219-t33_1-p1.