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CAZyme Information: ASPFODRAFT_56560-t33_1-p1

You are here: Home > Sequence: ASPFODRAFT_56560-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus luchuensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
CAZyme ID ASPFODRAFT_56560-t33_1-p1
CAZy Family GT15
CAZyme Description glycoside hydrolase family 28 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
482 52318.20 4.2223
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AluchuensisCBS106.47 13784 1137211 282 13502
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ASPFODRAFT_56560-t33_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 133 391 1e-39 0.7507692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 3.37e-21 160 383 61 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 2.42e-12 38 405 48 396
polygalacturonase
227721 Pgu1 5.17e-12 10 326 57 405
Polygalacturonase [Carbohydrate transport and metabolism].
177865 PLN02218 3.32e-10 38 355 69 383
polygalacturonase ADPG
178580 PLN03003 1.73e-09 38 353 25 330
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.43e-304 10 482 10 455
4.87e-303 10 482 10 455
9.10e-299 10 482 10 474
6.27e-289 1 482 1 489
5.33e-278 9 482 6 487

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.81e-78 19 475 1 418
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.46e-84 6 470 6 432
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
1.48e-83 6 470 6 432
Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1
2.37e-81 15 475 14 436
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
2.33e-80 1 475 1 436
Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1
3.56e-78 11 475 14 443
Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000223 0.999732 CS pos: 18-19. Pr: 0.9678

TMHMM  Annotations      help

There is no transmembrane helices in ASPFODRAFT_56560-t33_1-p1.