CAZyme Information: ASPFODRAFT_174518-t33_1-p1

Basic Information

• Species: Aspergillus luchuensis
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
• CAZyme ID: ASPFODRAFT_174518-t33_1-p1
• CAZy Family: CE4
• CAZyme Description: glycoside hydrolase family 28 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
384	KV878254|CGC1	40408.21	3.8268

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AluchuensisCBS106.47	13784	1137211	282	13502

• Gene Location: location=KV878254:169019-170357(-)

Full Sequence      

MVRQLILIGGLLAAVAVHAAPAEPAHPMVTEAPDANLIEKRATTCTFSGSEGASKASKSK
TSCSTIYLSDVAVPSGTTLDLTDLNDGTHVIFQGETTFGYEEWTGPLVSVSGTDITVEGE
SGAVLNGDGSRWWDGEGGNGGKTKPKFFYAHDLTSSTIKSIYVENSPVQVFSIDGSTDLT
MTDITVDNTDGDTDDLAANTDGFDIGESTYITITGAEIYNQDDCVAINSGENIYFSASVC
SGGHGLSIGSVGGRDDNTVKNVTFYDVNVLKSQQAIRIKTIYGDTGSVSEVTYHEIAFSD
ATDYGIIIEQNYDDTSKTPTTGVPITDFVLENIIGTCEDDDCTEVYIACGDGSCSDWTWT
GVSVTGGKVSDDCLNVPSGISCDL

Enzyme Prediction     

EC	3.2.1.15:80

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	60	382	1.1e-71	0.96

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395231	Glyco_hydro_28	2.25e-124	63	382	1	321	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865	PLN02218	1.85e-22	114	376	157	420	polygalacturonase ADPG
178580	PLN03003	2.30e-22	120	376	118	375	Probable polygalacturonase At3g15720
227721	Pgu1	2.39e-22	99	384	183	524	Polygalacturonase [Carbohydrate transport and metabolism].
215426	PLN02793	5.09e-17	115	353	145	382	Probable polygalacturonase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS17128.1|GH28	1.24e-278	1	384	1	384
BCS05577.1|GH28	1.24e-278	1	384	1	384
QUS93878.1|GH28	5.06e-278	1	384	1	384
CAK44905.1|GH28	4.27e-270	1	384	1	384
CAA45707.1|GH28|3.2.1.15	7.94e-268	1	384	1	383

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1IA5_A	1.77e-171	42	382	1	339	Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]
6KVE_A	8.98e-154	38	382	5	344	Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
6KVH_A	5.16e-153	38	382	5	344	Chain A, endo-polygalacturonase [Evansstolkia leycettana]
7E56_A	2.11e-150	45	382	3	336	Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1NHC_A	1.26e-139	43	382	1	336	Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A2QL39|PGLRC_ASPNC	7.58e-271	1	384	1	384	Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1
sp|Q12554|PGLRC_ASPNG	1.41e-268	1	384	1	383	Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1
sp|Q70HJ3|PGLRC_ASPAC	4.39e-254	1	384	1	384	Probable endopolygalacturonase C OS=Aspergillus aculeatus OX=5053 GN=pgaC PE=2 SV=1
sp|A2QBB6|PGLRE_ASPNC	6.02e-202	25	382	23	378	Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1
sp|O42809|PGLRE_ASPNG	1.21e-201	1	382	1	378	Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000240	0.999727	CS pos: 19-20. Pr: 0.9853

TMHMM  Annotations     

There is no transmembrane helices in ASPFODRAFT_174518-t33_1-p1.