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CAZyme Information: ASPFODRAFT_135215-t33_1-p1

You are here: Home > Sequence: ASPFODRAFT_135215-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus luchuensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
CAZyme ID ASPFODRAFT_135215-t33_1-p1
CAZy Family AA7
CAZyme Description glycoside hydrolase family 28 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
362 37617.82 4.7827
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AluchuensisCBS106.47 13784 1137211 282 13502
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 40 356 8.6e-74 0.9753846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.86e-153 45 362 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 5.68e-26 96 355 157 417
polygalacturonase ADPG
215540 PLN03010 1.01e-23 85 355 124 388
polygalacturonase
227721 Pgu1 1.99e-23 45 280 109 398
Polygalacturonase [Carbohydrate transport and metabolism].
215426 PLN02793 1.82e-20 45 353 80 406
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.09e-260 1 362 1 362
5.09e-260 1 362 1 362
4.18e-259 1 362 1 362
1.40e-257 1 362 1 362
2.48e-251 1 362 1 362

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.86e-249 1 362 1 362
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]
4.78e-174 24 362 5 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
4.78e-174 24 362 5 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
6.86e-172 29 362 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.77e-148 29 358 2 333
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.04e-261 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=pgaII PE=3 SV=2
2.48e-258 1 362 1 362
Endopolygalacturonase II OS=Aspergillus awamori OX=105351 GN=pgaII PE=1 SV=1
4.41e-252 1 362 1 362
Endopolygalacturonase II OS=Aspergillus niger OX=5061 PE=1 SV=1
4.41e-252 1 362 1 362
Endopolygalacturonase II OS=Aspergillus tubingensis OX=5068 GN=pgaII PE=1 SV=1
4.05e-248 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaII PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000249 0.999717 CS pos: 27-28. Pr: 0.8761

TMHMM  Annotations      help

There is no transmembrane helices in ASPFODRAFT_135215-t33_1-p1.