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CAZyme Information: ASPCADRAFT_509277-t33_1-p1

You are here: Home > Sequence: ASPCADRAFT_509277-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus carbonarius
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius
CAZyme ID ASPCADRAFT_509277-t33_1-p1
CAZy Family GT20
CAZyme Description glycoside hydrolase family 28 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
446 48745.47 4.3906
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AcarbonariusITEM5010 11735 602072 260 11475
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 79 426 4.6e-70 0.9569230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.29e-41 96 425 14 315
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 2.26e-32 149 438 117 393
Probable polygalacturonase At3g15720
215540 PLN03010 1.33e-30 107 427 107 391
polygalacturonase
215426 PLN02793 6.16e-30 107 416 111 399
Probable polygalacturonase
177865 PLN02218 7.90e-29 151 411 164 408
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.06e-279 1 441 1 439
1.06e-279 1 441 1 439
1.97e-277 25 441 23 438
1.97e-277 25 441 23 438
1.76e-240 21 437 17 434

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.46e-50 63 438 27 387
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
5.70e-22 144 429 75 342
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.64e-21 144 429 75 342
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
3.23e-21 144 429 67 334
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
5.91e-20 66 423 1 341
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.50e-278 25 441 23 438
Exopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgxB PE=3 SV=1
3.50e-278 25 441 23 438
Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxB PE=3 SV=1
2.20e-241 21 437 17 434
Probable exopolygalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxB PE=3 SV=2
3.12e-241 21 437 17 434
Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxB PE=3 SV=1
4.21e-239 21 438 17 435
Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.471339 0.528650 CS pos: 37-38. Pr: 0.2342

TMHMM  Annotations      help

There is no transmembrane helices in ASPCADRAFT_509277-t33_1-p1.