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CAZyme Information: ASPCADRAFT_211923-t33_1-p1

You are here: Home > Sequence: ASPCADRAFT_211923-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus carbonarius
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius
CAZyme ID ASPCADRAFT_211923-t33_1-p1
CAZy Family GH5
CAZyme Description glycoside hydrolase family 28 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
362 KV907516|CGC1 37448.55 4.7828
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AcarbonariusITEM5010 11735 602072 260 11475
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 40 356 5.7e-73 0.9753846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 5.20e-151 45 362 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 6.77e-29 31 355 81 417
polygalacturonase ADPG
215540 PLN03010 3.67e-26 85 355 124 388
polygalacturonase
215426 PLN02793 1.39e-23 33 353 68 406
Probable polygalacturonase
178580 PLN03003 1.43e-22 31 352 37 365
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.08e-229 1 362 1 362
1.08e-229 1 362 1 362
1.08e-229 1 362 1 362
1.08e-229 1 362 1 362
1.08e-229 1 362 1 362

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.38e-226 1 362 1 362
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]
2.27e-179 24 362 5 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.27e-179 24 362 5 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.29e-177 29 362 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
7.26e-151 29 358 2 333
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.92e-230 1 362 1 362
Endopolygalacturonase II OS=Aspergillus niger OX=5061 PE=1 SV=1
1.92e-230 1 362 1 362
Endopolygalacturonase II OS=Aspergillus tubingensis OX=5068 GN=pgaII PE=1 SV=1
9.08e-229 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=pgaII PE=3 SV=2
2.49e-226 1 362 1 362
Endopolygalacturonase II OS=Aspergillus awamori OX=105351 GN=pgaII PE=1 SV=1
7.12e-226 1 362 1 362
Endopolygalacturonase II OS=Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7) OX=380704 GN=pgaII PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000299 0.999670 CS pos: 26-27. Pr: 0.9449

TMHMM  Annotations      help

There is no transmembrane helices in ASPCADRAFT_211923-t33_1-p1.