CAZyme Information: ASPCADRAFT_209672-t33_1-p1

Basic Information

• Species: Aspergillus carbonarius
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius
• CAZyme ID: ASPCADRAFT_209672-t33_1-p1
• CAZy Family: GH37
• CAZyme Description: glycoside hydrolase family 28 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
536	KV907505|CGC1	57052.59	4.5532

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AcarbonariusITEM5010	11735	602072	260	11475

• Gene Location: location=KV907505:357548-359400(-)

Full Sequence      

MRVSKLSFLSFLGLAPIFAAAQLSGSVGPLTSASTKAATKTCNVLDYGAKADKSTDLGAP
LASAFADCKSGGLVYVPSGEYALSTWARLSGGEAWALQIDGVIYRDSTTSGNMIYIEHSS
DFELFSSTSSGALQGLGYELHKENNWSGPRLIRLYEVTDFSVHDFILVDSPSFHMSLDTC
TNGEIYNMAIRGGNHGGLDGIDIWSTNIWVHDVEVTNKDECVTIKSPAKNILVENVYCNW
SGGCGMGSFGTGTEVSDIIYRNIYTWNSNNMMLIKSNGGSGYIENVVLENFIGHGNAYSL
DIDSYWASMSAVEGDGVQLSNFTIKNWKGTEAYGLNRGPIKMICADGAPCYDITIEDFAM
WTEKGDRQWYSCESAYGTGFCLQDSSDHVSYAVTTTTVYTAPSGYSAATMAADLTTAFGS
TVSIPIPTIPTSFYPGATPYSALMADSSSSTAKARALSASGSAATHASISSSSISSAAVA
QTESIPVATSTIVAISSAAEEALLLLPDRPDTANRVSRASRRFATCSNLLWSQSSW

Enzyme Prediction     

EC	3.2.1.171:11

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	64	375	1.3e-56	0.9661538461538461

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
215540	PLN03010	5.97e-22	43	387	48	395	polygalacturonase
395231	Glyco_hydro_28	6.23e-18	149	357	85	300	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
165802	PLN02155	3.17e-16	35	377	21	380	polygalacturonase
215426	PLN02793	3.26e-16	130	378	150	412	Probable polygalacturonase
177865	PLN02218	3.20e-15	33	356	60	404	polygalacturonase ADPG

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK48512.1|GH28	3.89e-300	1	494	1	492
BCS11707.1|GH28	1.24e-299	1	494	1	492
BCR99404.1|GH28	1.24e-299	1	494	1	492
CAA63912.1|GH28|3.2.1.171	1.58e-299	1	494	1	492
BAE66335.1|GH28	4.19e-272	1	455	1	456

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RMG_A	2.31e-226	22	443	1	420	Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A2R3G4|RHGB_ASPNC	6.91e-301	1	494	1	492	Probable rhamnogalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgB PE=3 SV=1
sp|P87161|RHGB_ASPNG	2.81e-300	1	494	1	492	Rhamnogalacturonase B OS=Aspergillus niger OX=5061 GN=rhgB PE=1 SV=1
sp|Q2TWN8|RHGB_ASPOR	7.44e-273	1	455	1	456	Probable rhamnogalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgB PE=3 SV=1
sp|Q0CFC7|RHGB_ASPTN	9.32e-270	1	455	1	454	Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1
sp|A1DED1|RHGB_NEOFI	3.72e-269	1	455	1	455	Probable rhamnogalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rhgB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000294	0.999692	CS pos: 21-22. Pr: 0.6652

TMHMM  Annotations     

There is no transmembrane helices in ASPCADRAFT_209672-t33_1-p1.