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CAZyme Information: ASPCADRAFT_206618-t33_1-p1

You are here: Home > Sequence: ASPCADRAFT_206618-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus carbonarius
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius
CAZyme ID ASPCADRAFT_206618-t33_1-p1
CAZy Family GH28
CAZyme Description glycoside hydrolase family 28 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
372 38836.38 3.8859
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AcarbonariusITEM5010 11735 602072 260 11475
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 49 370 7e-77 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.96e-141 52 370 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 6.88e-30 22 364 64 420
polygalacturonase ADPG
227721 Pgu1 4.64e-26 94 340 189 455
Polygalacturonase [Carbohydrate transport and metabolism].
215426 PLN02793 2.43e-25 49 361 77 406
Probable polygalacturonase
215540 PLN03010 2.69e-25 114 369 149 394
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.38e-249 1 372 1 370
2.38e-249 1 372 1 370
2.38e-249 1 372 1 370
2.77e-248 1 372 1 370
1.60e-247 1 372 1 370

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.94e-176 35 370 1 336
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]
1.16e-172 33 370 7 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.16e-172 33 370 7 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
1.92e-169 36 370 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.08e-153 1 370 1 362
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.22e-250 1 372 1 370
Probable endopolygalacturonase A OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=pgaA PE=3 SV=1
4.92e-249 1 372 1 370
Endopolygalacturonase A OS=Aspergillus awamori OX=105351 GN=pgaA PE=1 SV=1
2.85e-248 1 372 1 370
Probable endopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaA PE=3 SV=1
2.85e-248 1 372 1 370
Endopolygalacturonase A OS=Aspergillus niger OX=5061 GN=pgaA PE=1 SV=1
1.30e-195 1 370 1 368
Probable endopolygalacturonase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000270 0.999708 CS pos: 21-22. Pr: 0.9807

TMHMM  Annotations      help

There is no transmembrane helices in ASPCADRAFT_206618-t33_1-p1.