CAZyme Information: ASPCADRAFT_206441-t33_1-p1

Basic Information

• Species: Aspergillus carbonarius
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius
• CAZyme ID: ASPCADRAFT_206441-t33_1-p1
• CAZy Family: GH28
• CAZyme Description: GMC oxidoreductase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
542		60288.65	6.7643

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AcarbonariusITEM5010	11735	602072	260	11475

• Gene Location: location=KV907498:67945-69677(+)

Full Sequence      

MATTNEFPASDVNSYDYVIVGGGTAGCVIASRLAEYLPNKRILIIEGGPSDYMDDRVLNL
REWLNLLGGELDYDYPTTEQPMGNSHIRHSRAKVLGGCSSHNTLISFRPFEYDCKRWEQA
GCTGWSFETFTRVLDNLRNTIQPVHSRHRNQLCKDWVQACSSAMNIPIIPDFNKEIRSKG
ELTEGVGFFSVSYNPDDGRRSSASVAYIHPILRGEEKRPNLTILTNAWVSRVNINGNTVT
GVDVTLQSGVKHTLRAKKETILCAGAVDTPRLMMLSGLGPREQLSSLGIPVVKDIPGVGE
NLLDHPESIIIWELNRPVPPNQTTMDSDAGIFLRRELPNAHGFDGRAADIMMHCYQIPFC
LNTERLGYDTPIDAFCMTPNIPRPRSRGRIYLTSADPNVKPALDFRYFTDPEGYDAATIV
AGLKAAREIAQQSPFKEWIKREVAPGPSVQTDEELSEYGRRVAHTVYHPAGTTKMGNLTR
DPMAVVDPKLKVRGLKNIRIADAGVFPEMPTINPMLTVLAIGERAAELIAEEAGWKREQP
RL

Enzyme Prediction     

No EC number prediction in ASPCADRAFT_206441-t33_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	10	538	2.4e-94	0.5194174757281553

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	6.51e-124	13	534	6	538	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	5.12e-120	13	529	4	531	choline dehydrogenase; Validated
398739	GMC_oxred_C	7.75e-46	384	525	1	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	3.96e-32	13	522	54	569	Protein HOTHEAD
366272	GMC_oxred_N	3.45e-31	15	307	1	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS03844.1|AA3_2	0.0	1	542	90	631
BCS15458.1|AA3_2	0.0	1	542	1	542
CAK47101.1|AA3_2	0.0	1	542	1	542
EAA64559.1|AA3_2	0.0	1	542	1	542
QMW36122.1|AA3_2	0.0	1	542	1	542

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2JBV_A	8.12e-129	15	529	14	526	Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
3NNE_A	1.15e-128	15	529	14	526	Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
3LJP_A	3.23e-128	15	529	14	526	Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
7AV4_AAA	2.10e-58	15	533	84	640	Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6ZH7_A	2.90e-58	15	533	8	564	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q7X2H8|CHOX_ARTGO	4.18e-128	15	529	14	526	Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1
sp|Q988C9|4PADH_RHILO	4.77e-79	14	530	6	534	4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
sp|Q9WWW2|ALKJ_PSEPU	1.25e-77	15	532	2	530	Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
sp|Q4L9D7|BETA_STAHJ	7.04e-77	10	529	2	534	Oxygen-dependent choline dehydrogenase OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=betA PE=3 SV=1
sp|Q00593|ALKJ_PSEOL	2.14e-76	15	529	2	527	Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000041	0.000004

TMHMM  Annotations     

There is no transmembrane helices in ASPCADRAFT_206441-t33_1-p1.