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CAZyme Information: ASPCADRAFT_18568-t33_1-p1

You are here: Home > Sequence: ASPCADRAFT_18568-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus carbonarius
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius
CAZyme ID ASPCADRAFT_18568-t33_1-p1
CAZy Family GH13
CAZyme Description polysaccharide lyase family 1 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
358 37941.28 6.3272
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AcarbonariusITEM5010 11735 602072 260 11475
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:25

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 93 277 2.2e-88 0.9893048128342246

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 4.32e-59 90 279 1 190
Amb_all domain.
366158 Pec_lyase_C 8.47e-20 102 275 29 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
226384 PelB 7.54e-18 7 277 35 275
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.67e-220 1 358 22 379
2.27e-218 1 358 22 379
2.27e-218 1 358 22 379
2.27e-218 1 358 22 379
1.04e-216 1 358 22 378

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.07e-219 1 358 2 359
Pectin Lyase B [Aspergillus niger]
1.64e-153 1 357 2 357
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
1.64e-153 1 357 2 357
Pectin Lyase A [Aspergillus niger]
7.99e-11 9 240 17 290
Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
8.87e-10 103 249 76 243
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.97e-221 1 358 22 379
Probable pectin lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelB PE=3 SV=1
1.84e-217 1 358 22 378
Pectin lyase B OS=Aspergillus niger OX=5061 GN=pelB PE=1 SV=1
8.89e-184 4 358 25 380
Pectin lyase 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pel1 PE=2 SV=1
2.53e-171 1 358 22 379
Probable pectin lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelA PE=3 SV=1
5.50e-170 2 358 21 377
Probable pectin lyase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.950970 0.049044

TMHMM  Annotations      help

There is no transmembrane helices in ASPCADRAFT_18568-t33_1-p1.