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CAZyme Information: ASPCADRAFT_170310-t33_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus carbonarius | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius | |||||||||||
| CAZyme ID | ASPCADRAFT_170310-t33_1-p1 | |||||||||||
| CAZy Family | GH1 | |||||||||||
| CAZyme Description | glycoside hydrolase family 28 protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 79 | 395 | 2.8e-73 | 0.9753846153846154 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.49e-122 | 84 | 399 | 3 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 178580 | PLN03003 | 1.38e-25 | 141 | 357 | 120 | 333 | Probable polygalacturonase At3g15720 |
| 177865 | PLN02218 | 2.24e-23 | 133 | 395 | 157 | 422 | polygalacturonase ADPG |
| 227721 | Pgu1 | 5.67e-22 | 118 | 328 | 183 | 408 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215540 | PLN03010 | 9.47e-22 | 128 | 398 | 137 | 394 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.75e-241 | 21 | 399 | 1 | 378 | |
| 3.90e-241 | 21 | 399 | 1 | 378 | |
| 3.90e-241 | 21 | 399 | 1 | 378 | |
| 7.86e-241 | 21 | 399 | 1 | 378 | |
| 1.36e-189 | 39 | 399 | 20 | 382 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.73e-179 | 61 | 399 | 1 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 8.78e-158 | 57 | 399 | 5 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 5.04e-157 | 57 | 399 | 5 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 7.65e-157 | 63 | 399 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.10e-139 | 62 | 399 | 1 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.88e-242 | 21 | 399 | 1 | 378 | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1 |
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| 1.40e-241 | 21 | 399 | 1 | 378 | Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1 |
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| 1.10e-188 | 21 | 399 | 1 | 381 | Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1 |
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| 3.25e-188 | 39 | 399 | 20 | 382 | Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1 |
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| 2.48e-186 | 25 | 399 | 4 | 378 | Endopolygalacturonase I OS=Aspergillus aculeatus OX=5053 GN=pgaI PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.306342 | 0.693643 | CS pos: 41-42. Pr: 0.6458 |