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CAZyme Information: ASPCADRAFT_139451-t33_1-p1

You are here: Home > Sequence: ASPCADRAFT_139451-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus carbonarius
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus carbonarius
CAZyme ID ASPCADRAFT_139451-t33_1-p1
CAZy Family AA7
CAZyme Description glycoside hydrolase family 28 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
442 KV907494|CGC15 48109.28 4.6508
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AcarbonariusITEM5010 11735 602072 260 11475
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 60 420 6.3e-50 0.9538461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.54e-31 100 395 31 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 9.91e-28 44 419 57 388
polygalacturonase
177865 PLN02218 1.66e-21 23 327 56 358
polygalacturonase ADPG
215426 PLN02793 1.57e-17 20 326 37 342
Probable polygalacturonase
178580 PLN03003 1.26e-15 191 370 172 347
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.59e-284 1 442 1 440
2.95e-283 1 441 1 439
2.95e-283 1 441 1 439
5.94e-283 1 442 1 440
5.11e-244 10 437 12 434

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.14e-18 95 367 33 318
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.53e-17 95 367 25 310
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.75e-17 137 366 81 322
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
6.51e-17 85 384 50 352
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]
1.57e-12 117 326 61 264
Endopolygalacturonase I from Stereum purpureum at 0.96 A resolution [Chondrostereum purpureum],1KCC_A Endopolygalacturonase I from Stereum purpureum complexed with a galacturonate at 1.00 A resolution. [Chondrostereum purpureum],1KCD_A Endopolygalacturonase I from Stereum purpureum complexed with two galacturonate at 1.15 A resolution. [Chondrostereum purpureum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.06e-283 1 442 1 440
Probable exopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxC PE=3 SV=2
1.06e-283 1 442 1 440
Exopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgxC PE=2 SV=1
9.07e-245 10 437 12 434
Probable exopolygalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxC PE=3 SV=1
9.07e-245 10 437 12 434
Probable exopolygalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxC PE=3 SV=1
2.78e-240 30 441 23 429
Probable exopolygalacturonase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000218 0.999767 CS pos: 19-20. Pr: 0.9861

TMHMM  Annotations      help

There is no transmembrane helices in ASPCADRAFT_139451-t33_1-p1.