CAZyme Information: ASPACDRAFT_35786-t33_1-p1

Basic Information

• Species: Aspergillus aculeatus
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus aculeatus
• CAZyme ID: ASPACDRAFT_35786-t33_1-p1
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
373	KV878988|CGC4	38931.40	3.9444

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AaculeatusATCC16872	11165	690307	322	10843

• Gene Location: location=KV878988:150594-151776(-)

Full Sequence      

MKYAAVLTAVAALAQRAVAVGVSGSPVGFAASATGGGSATPVYPSTTDELVSYLGDDEER
VIVLSKTFDFTGTEGTTTTTGCAPWGTASGCQVAINQDDWCTNYEPDAPSVSVTYDNAGV
LGITVGSNKSLIGEGTSGVIKGKGLRLVSGVSNIIIQNIAITDINAEYVWGGDAITLDEA
DLVWIDHVTTARIGRQHYVLGTSADERVSITNNFINGETDYSATCDGYTYWNAYFDGSSD
KVTFAGNYLYKTSGRAPKVQDNTYLHIYNNYWKDNSGHAFEIGSGGYVLAEGNYFEDVDT
VLETDTFEGALFSSDSASSTCSSYIGRSCVANTNGGDLTGTSTTALEAFDGDSLPTPSAA
STDPATSAGQGNL

Enzyme Prediction     

EC	4.2.2.10:25

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	113	297	1.7e-90	0.9893048128342246

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
214765	Amb_all	1.21e-57	111	299	2	190	Amb_all domain.
226384	PelB	1.53e-16	123	297	97	275	Pectate lyase [Carbohydrate transport and metabolism].
366158	Pec_lyase_C	7.42e-15	123	295	30	211	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK47350.1|PL1_4|4.2.2.10	4.77e-234	1	373	1	373
AAA32701.1|PL1_4|4.2.2.10	6.77e-234	1	373	1	373
GAA92866.1|PL1_4|4.2.2.10	3.41e-227	1	373	1	373
BCR99717.1|PL1_4	3.41e-227	1	373	1	373
CAP80630.1|PL1_4	2.34e-211	1	373	1	373

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1IDK_A	3.08e-174	20	373	1	359	Pectin Lyase A [Aspergillus niger]
1IDJ_A	1.25e-173	20	373	1	359	Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
1QCX_A	4.08e-153	21	354	2	338	Pectin Lyase B [Aspergillus niger]
3VMV_A	3.41e-11	128	298	80	249	Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1VBL_A	4.96e-09	123	302	128	340	Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A2RBL2|PELD_ASPNC	8.47e-235	1	373	1	373	Probable pectin lyase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelD PE=3 SV=1
sp|P22864|PELD_ASPNG	1.20e-234	1	373	1	373	Pectin lyase D OS=Aspergillus niger OX=5061 GN=pelD PE=1 SV=1
sp|Q2TXS4|PELD_ASPOR	2.88e-201	1	373	1	375	Pectin lyase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pel2 PE=1 SV=1
sp|B8NVB7|PELD_ASPFN	2.88e-201	1	373	1	375	Probable pectin lyase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelD PE=3 SV=1
sp|B0YCL3|PELB_ASPFC	4.30e-196	1	373	1	375	Probable pectin lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelB PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000287	0.999705	CS pos: 19-20. Pr: 0.8933

TMHMM  Annotations     

There is no transmembrane helices in ASPACDRAFT_35786-t33_1-p1.