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CAZyme Information: APA15446.1

You are here: Home > Sequence: APA15446.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA15446.1
CAZy Family GT3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
609 CP017827|CGC1 67666.93 4.5378
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in APA15446.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 130 594 1e-130 0.9766899766899767

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 1.00e-124 131 591 5 444
Glycosyl hydrolase family 1.
225343 BglB 2.30e-112 130 591 3 446
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 2.11e-80 131 591 28 476
beta-glucosidase
215539 PLN02998 4.65e-76 131 596 31 486
beta-glucosidase
215455 PLN02849 9.25e-76 131 596 30 481
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 609 1 609
0.0 1 609 1 576
1.88e-259 50 596 43 592
7.20e-251 51 601 20 569
5.28e-250 172 609 2 489

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.04e-110 76 576 40 547
Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis [Hamamotoa singularis]
1.40e-109 76 576 8 515
Crystal structure of the E496A mutant of HsBglA in complex with 4-galactosyllactose [Hamamotoa singularis],6M55_D Crystal structure of the E496A mutant of HsBglA in complex with 4-galactosyllactose [Hamamotoa singularis]
3.93e-109 76 576 40 547
Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis],6M4F_C Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis],6M4F_E Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis],6M4F_G Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis]
2.17e-108 130 576 88 547
Chain A, Beta-hexosyltransferase [Hamamotoa singularis],7L74_B Chain B, Beta-hexosyltransferase [Hamamotoa singularis]
1.40e-89 131 584 34 491
Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTK_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.29e-89 117 584 29 496
Beta-glucosidase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU11 PE=3 SV=2
1.51e-89 117 584 28 496
Beta-glucosidase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU12 PE=1 SV=2
8.28e-89 131 584 39 496
Beta-glucosidase 12 OS=Oryza sativa subsp. indica OX=39946 GN=BGLU12 PE=3 SV=1
4.20e-86 131 577 22 492
Raucaffricine-O-beta-D-glucosidase OS=Rauvolfia serpentina OX=4060 GN=RG PE=1 SV=1
3.39e-85 130 584 32 490
Beta-glucosidase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU24 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000328 0.999676 CS pos: 15-16. Pr: 0.9657

TMHMM  Annotations      help

There is no transmembrane helices in APA15446.1.