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CAZyme Information: APA13794.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA13794.1 | |||||||||||
| CAZy Family | GH95 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.67:2 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 39 | 393 | 2.5e-42 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 8.75e-31 | 60 | 394 | 16 | 314 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 3.51e-14 | 100 | 392 | 133 | 406 | Probable polygalacturonase |
| 215540 | PLN03010 | 5.57e-13 | 32 | 397 | 61 | 391 | polygalacturonase |
| 177865 | PLN02218 | 4.19e-11 | 32 | 307 | 82 | 360 | polygalacturonase ADPG |
| 227721 | Pgu1 | 1.16e-10 | 153 | 292 | 248 | 398 | Polygalacturonase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.98e-302 | 1 | 413 | 1 | 413 | |
| 2.32e-243 | 1 | 413 | 1 | 414 | |
| 6.65e-243 | 1 | 413 | 1 | 414 | |
| 1.51e-177 | 1 | 386 | 1 | 391 | |
| 5.19e-134 | 19 | 410 | 30 | 418 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.67e-16 | 69 | 392 | 31 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 6.67e-16 | 69 | 392 | 31 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.04e-15 | 69 | 342 | 23 | 308 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 5.41e-15 | 20 | 321 | 18 | 329 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 6.19e-13 | 31 | 342 | 5 | 321 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.03e-69 | 10 | 413 | 14 | 440 | Probable exopolygalacturonase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxC PE=3 SV=1 |
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| 1.94e-67 | 10 | 409 | 14 | 436 | Probable exopolygalacturonase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgxC PE=3 SV=1 |
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| 2.95e-66 | 10 | 409 | 14 | 436 | Probable exopolygalacturonase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxC PE=3 SV=1 |
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| 3.85e-66 | 26 | 412 | 40 | 436 | Probable exopolygalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxC PE=3 SV=1 |
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| 3.85e-66 | 26 | 412 | 40 | 436 | Probable exopolygalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000328 | 0.999647 | CS pos: 17-18. Pr: 0.9722 |