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CAZyme Information: APA13598.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA13598.1 | |||||||||||
| CAZy Family | GH78 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.8:12 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH11 | 57 | 218 | 5e-59 | 0.9209039548022598 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395367 | Glyco_hydro_11 | 3.41e-82 | 49 | 218 | 3 | 175 | Glycosyl hydrolases family 11. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.46e-157 | 1 | 222 | 1 | 222 | |
| 1.46e-157 | 1 | 222 | 1 | 222 | |
| 2.67e-144 | 1 | 222 | 1 | 222 | |
| 2.67e-144 | 1 | 222 | 1 | 222 | |
| 4.22e-99 | 1 | 222 | 1 | 229 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.94e-94 | 46 | 222 | 1 | 177 | Chain A, Endo-1,4-beta-xylanase I [Trichoderma reesei] |
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| 6.94e-53 | 54 | 222 | 27 | 190 | HIGH-RESOLUTION STRUCTURES OF XYLANASES FROM B. CIRCULANS AND T. HARZIANUM IDENTIFY A NEW FOLDING PATTERN AND IMPLICATIONS FOR THE ATOMIC BASIS OF THE CATALYSIS [Trichoderma harzianum] |
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| 1.32e-52 | 44 | 222 | 27 | 210 | Crystal structure of Aspergillus niger GH11 endoxylanase XynA in complex with xylobiose epoxide activity based probe [Aspergillus niger] |
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| 1.64e-52 | 49 | 222 | 5 | 183 | Endo-1,4-Beta-Xylanase C [Aspergillus awamori],1T6G_C Chain C, Endo-1,4-beta-xylanase I [Aspergillus niger],1T6G_D Chain D, Endo-1,4-beta-xylanase I [Aspergillus niger] |
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| 4.65e-52 | 49 | 222 | 5 | 183 | Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_B Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_C Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_D Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.69e-98 | 1 | 222 | 1 | 228 | Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=TRIREDRAFT_74223 PE=1 SV=1 |
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| 1.69e-98 | 1 | 222 | 1 | 228 | Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=xyn1 PE=1 SV=1 |
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| 3.36e-71 | 14 | 213 | 8 | 210 | Endo-1,4-beta-xylanase B OS=Talaromyces funiculosus OX=28572 GN=xynB PE=1 SV=1 |
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| 4.38e-55 | 1 | 222 | 1 | 221 | Endo-1,4-beta-xylanase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnB PE=2 SV=2 |
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| 1.40e-54 | 35 | 221 | 27 | 224 | Endo-1,4-beta-xylanase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.071529 | 0.928437 | CS pos: 21-22. Pr: 0.7299 |