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CAZyme Information: APA12726.1

You are here: Home > Sequence: APA12726.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA12726.1
CAZy Family GH55
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
553 CP017823|CGC8 58891.21 4.4737
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.3:94

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH15 54 457 8.4e-77 0.961218836565097

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395586 Glyco_hydro_15 4.86e-133 41 458 1 415
Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.
225922 SGA1 3.77e-07 61 463 259 605
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 553 1 553
0.0 1 550 1 549
0.0 1 551 1 550
0.0 1 550 1 549
0.0 1 550 1 549

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.47e-185 32 505 2 474
Chain A, GLUCOAMYLASE [Trichoderma reesei],2VN7_A Chain A, GLUCOAMYLASE [Trichoderma reesei]
2.43e-181 30 502 1 467
Catalytic domain of glucoamylase from aspergillus niger complexed with tris and glycerol [Aspergillus niger]
9.81e-181 30 502 1 466
Refined structure for the complex of acarbose with glucoamylase from Aspergillus awamori var. x100 to 2.4 angstroms resolution [Aspergillus awamori],1DOG_A REFINED STRUCTURE FOR THE COMPLEX OF 1-DEOXYNOJIRIMYCIN WITH GLUCOAMYLASE FROM (ASPERGILLUS AWAMORI) VAR. X100 TO 2.4 ANGSTROMS RESOLUTION [Aspergillus awamori],1GLM_A REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100 [Aspergillus awamori],3GLY_A REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100 [Aspergillus awamori]
1.02e-180 30 502 1 466
GLUCOAMYLASE-471 COMPLEXED WITH ACARBOSE [Aspergillus awamori]
1.05e-180 30 502 1 466
GLUCOAMYLASE-471 COMPLEXED WITH D-GLUCO-DIHYDROACARBOSE [Aspergillus awamori]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.34e-178 5 502 4 491
Glucoamylase OS=Aspergillus niger OX=5061 GN=GLAA PE=1 SV=1
1.34e-178 5 502 4 491
Glucoamylase OS=Aspergillus awamori OX=105351 GN=GLAA PE=1 SV=1
3.69e-178 5 502 4 490
Glucoamylase OS=Aspergillus usamii OX=186680 GN=glaA PE=3 SV=1
2.75e-177 32 502 37 502
Glucoamylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=gla-1 PE=1 SV=3
6.77e-176 5 502 4 490
Glucoamylase I OS=Aspergillus kawachii OX=1069201 GN=gaI PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.819108 0.180904

TMHMM  Annotations      help

There is no transmembrane helices in APA12726.1.