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CAZyme Information: APA12156.1

You are here: Home > Sequence: APA12156.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA12156.1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
405 CP017822|CGC3 44689.14 5.9586
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in APA12156.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH76 54 389 8.3e-68 0.8770949720670391

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397638 Glyco_hydro_76 7.55e-21 54 393 5 348
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.
227170 COG4833 4.82e-09 131 376 89 323
Predicted alpha-1,6-mannanase, GH76 family [Carbohydrate transport and metabolism].
395616 Glyco_hydro_9 0.007 134 200 211 270
Glycosyl hydrolase family 9.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.85e-302 1 405 1 405
1.27e-206 1 404 1 406
1.27e-206 1 404 1 406
2.51e-190 45 404 1 359
2.53e-103 49 400 44 376

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.18e-07 62 303 159 399
Crystal Structure of a family 76 glycoside hydrolase from a bovine Bacteroides thetaiotaomicron strain [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.65e-10 156 396 149 388
Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DFG5 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000384 0.999592 CS pos: 24-25. Pr: 0.9581

TMHMM  Annotations      help

There is no transmembrane helices in APA12156.1.