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CAZyme Information: APA11010.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA11010.1 | |||||||||||
| CAZy Family | GH31 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:3 | 3.2.1.15:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 39 | 321 | 7.4e-68 | 0.9409722222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395871 | Pectinesterase | 1.22e-36 | 39 | 308 | 2 | 266 | Pectinesterase. |
| 178051 | PLN02432 | 3.77e-35 | 39 | 321 | 13 | 274 | putative pectinesterase |
| 178372 | PLN02773 | 1.06e-33 | 33 | 308 | 1 | 270 | pectinesterase |
| 215367 | PLN02682 | 3.32e-31 | 28 | 320 | 60 | 348 | pectinesterase family protein |
| 215357 | PLN02665 | 1.15e-29 | 22 | 320 | 58 | 341 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.19e-245 | 1 | 344 | 1 | 344 | |
| 7.65e-203 | 1 | 344 | 1 | 346 | |
| 7.65e-203 | 1 | 344 | 1 | 346 | |
| 7.65e-203 | 1 | 344 | 1 | 346 | |
| 8.62e-186 | 5 | 344 | 4 | 346 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.61e-55 | 31 | 343 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 8.91e-55 | 31 | 343 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 3.12e-19 | 49 | 309 | 17 | 274 | Pectin methylesterase from Carrot [Daucus carota] |
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| 3.69e-18 | 49 | 308 | 13 | 269 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 4.75e-06 | 51 | 308 | 48 | 366 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.03e-98 | 26 | 344 | 15 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 3.23e-92 | 24 | 343 | 13 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 4.17e-55 | 19 | 343 | 17 | 324 | Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1 |
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| 1.26e-54 | 31 | 343 | 31 | 327 | Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1 |
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| 3.25e-54 | 19 | 343 | 17 | 324 | Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000284 | 0.999693 | CS pos: 27-28. Pr: 0.7967 |