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CAZyme Information: APA10229.1

You are here: Home > Sequence: APA10229.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA10229.1
CAZy Family GH28
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1109 127730.02 6.7831
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.13:8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH31 348 919 1.8e-111 0.9929742388758782

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
269887 GH31_lyase_GLase 8.09e-165 366 803 1 347
alpha-1,4-glucan lyase. GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
395838 Glyco_hydro_31 9.61e-114 348 919 2 442
Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases.
269890 GH31_glucosidase_II_MalA 1.09e-83 366 803 1 339
Alpha-glucosidase II-like. Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This subgroup also includes the MalA alpha-glucosidase from Sulfolobus solfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
224418 YicI 6.78e-77 269 964 166 709
Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism].
269889 GH31_GANC_GANAB_alpha 1.87e-76 366 964 1 467
neutral alpha-glucosidase C, neutral alpha-glucosidase AB. This subgroup includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 1109 1 1109
0.0 17 1095 3 1063
0.0 17 1097 5 1094
0.0 18 1095 4 1062
0.0 18 1095 4 1062

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.02e-56 266 982 220 934
Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase [Gracilariopsis lemaneiformis],2X2H_B Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase [Gracilariopsis lemaneiformis],2X2H_C Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase [Gracilariopsis lemaneiformis],2X2H_D Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase [Gracilariopsis lemaneiformis],2X2I_A Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose [Gracilariopsis lemaneiformis],2X2I_B Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose [Gracilariopsis lemaneiformis],2X2I_C Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose [Gracilariopsis lemaneiformis],2X2I_D Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose [Gracilariopsis lemaneiformis],2X2J_A Crystal structure of the Gracilariopsis lemaneiformis alpha- 1,4-glucan lyase with deoxynojirimycin [Gracilariopsis lemaneiformis],2X2J_B Crystal structure of the Gracilariopsis lemaneiformis alpha- 1,4-glucan lyase with deoxynojirimycin [Gracilariopsis lemaneiformis],2X2J_C Crystal structure of the Gracilariopsis lemaneiformis alpha- 1,4-glucan lyase with deoxynojirimycin [Gracilariopsis lemaneiformis],2X2J_D Crystal structure of the Gracilariopsis lemaneiformis alpha- 1,4-glucan lyase with deoxynojirimycin [Gracilariopsis lemaneiformis],4AMW_A CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride [Gracilariopsis lemaneiformis],4AMW_B CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride [Gracilariopsis lemaneiformis],4AMW_C CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride [Gracilariopsis lemaneiformis],4AMW_D CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride [Gracilariopsis lemaneiformis],4AMX_A CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride [Gracilariopsis lemaneiformis],4AMX_B CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride [Gracilariopsis lemaneiformis],4AMX_C CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride [Gracilariopsis lemaneiformis],4AMX_D CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride [Gracilariopsis lemaneiformis]
1.71e-44 316 966 105 654
Chain A, ALPHA-GLUCOSIDASE [Blautia obeum ATCC 29174],3NUK_B Chain B, ALPHA-GLUCOSIDASE [Blautia obeum ATCC 29174],3PHA_A The crystal structure of the W169Y mutant of alpha-glucosidase (gh31 family) from Ruminococcus obeum atcc 29174 in complex with acarbose [Blautia obeum ATCC 29174],3PHA_B The crystal structure of the W169Y mutant of alpha-glucosidase (gh31 family) from Ruminococcus obeum atcc 29174 in complex with acarbose [Blautia obeum ATCC 29174],3PHA_C The crystal structure of the W169Y mutant of alpha-glucosidase (gh31 family) from Ruminococcus obeum atcc 29174 in complex with acarbose [Blautia obeum ATCC 29174],3PHA_D The crystal structure of the W169Y mutant of alpha-glucosidase (gh31 family) from Ruminococcus obeum atcc 29174 in complex with acarbose [Blautia obeum ATCC 29174],6C9Z_A Chain A, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174],6C9Z_B Chain B, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174],6CA3_A Chain A, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174],6CA3_B Chain B, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174]
7.35e-44 316 966 105 654
Chain A, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174],6C9X_B Chain B, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174]
7.35e-44 316 966 105 654
Chain A, Uncharacterized protein [Blautia obeum ATCC 29174],3M46_B Chain B, Uncharacterized protein [Blautia obeum ATCC 29174]
7.35e-44 316 966 105 654
Chain A, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174],6CA1_B Chain B, Glycosyl hydrolase, family 31 [Blautia obeum ATCC 29174]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.78e-62 250 962 149 711
Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens OX=1425 PE=3 SV=1
1.32e-47 293 964 273 818
Probable glucan 1,3-alpha-glucosidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0216600 PE=3 SV=1
2.07e-44 271 966 255 822
Probable glucan 1,3-alpha-glucosidase OS=Arabidopsis thaliana OX=3702 GN=PSL5 PE=1 SV=1
1.23e-43 300 962 322 849
Neutral alpha-glucosidase AB OS=Homo sapiens OX=9606 GN=GANAB PE=1 SV=3
5.01e-43 300 962 322 849
Neutral alpha-glucosidase AB OS=Macaca fascicularis OX=9541 GN=GANAB PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000079 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in APA10229.1.