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CAZyme Information: APA10154.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA10154.1 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 218 | 748 | 6.6e-47 | 0.5210355987055016 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 366272 | GMC_oxred_N | 3.45e-62 | 273 | 499 | 4 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 225186 | BetA | 3.69e-33 | 224 | 738 | 9 | 537 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 398739 | GMC_oxred_C | 2.28e-25 | 589 | 730 | 14 | 139 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 235241 | PRK04176 | 4.29e-07 | 219 | 257 | 22 | 60 | ribulose-1,5-biphosphate synthetase; Provisional |
| 274143 | pyranose_ox | 4.37e-06 | 650 | 729 | 469 | 533 | pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.49e-233 | 10 | 742 | 10 | 734 | |
| 5.05e-11 | 211 | 741 | 6 | 532 | |
| 1.54e-10 | 211 | 741 | 6 | 532 | |
| 1.78e-10 | 211 | 741 | 95 | 621 | |
| 6.16e-10 | 212 | 741 | 7 | 532 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.06e-07 | 214 | 732 | 221 | 757 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.72e-91 | 125 | 743 | 67 | 723 | Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2 |
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| 6.21e-87 | 96 | 743 | 65 | 743 | Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2 |
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| 2.43e-86 | 81 | 743 | 58 | 747 | Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1 |
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| 6.46e-84 | 82 | 743 | 57 | 745 | Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1 |
|
| 6.09e-83 | 82 | 742 | 52 | 740 | Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000059 | 0.000000 |