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CAZyme Information: APA09914.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA09914.1 | |||||||||||
| CAZy Family | GH26 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.67:7 | 3.2.1.-:2 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 84 | 441 | 1.2e-77 | 0.9784615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 5.62e-39 | 156 | 440 | 54 | 317 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 9.52e-34 | 110 | 435 | 93 | 406 | Probable polygalacturonase |
| 178580 | PLN03003 | 1.20e-28 | 155 | 438 | 113 | 375 | Probable polygalacturonase At3g15720 |
| 215120 | PLN02188 | 3.16e-28 | 73 | 438 | 46 | 390 | polygalacturonase/glycoside hydrolase family protein |
| 177865 | PLN02218 | 2.77e-27 | 63 | 448 | 63 | 431 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 455 | 1 | 455 | |
| 7.13e-273 | 1 | 455 | 1 | 456 | |
| 1.01e-272 | 1 | 455 | 1 | 456 | |
| 2.90e-272 | 1 | 455 | 1 | 456 | |
| 1.53e-249 | 1 | 447 | 1 | 459 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.66e-75 | 77 | 453 | 30 | 388 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 8.24e-24 | 78 | 442 | 15 | 342 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 8.24e-24 | 78 | 442 | 15 | 342 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.85e-23 | 78 | 442 | 7 | 334 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.39e-20 | 82 | 394 | 11 | 304 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.00e-196 | 50 | 447 | 34 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2 |
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| 1.00e-196 | 50 | 447 | 34 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2 |
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| 1.16e-195 | 50 | 447 | 34 | 431 | Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2 |
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| 3.62e-193 | 50 | 447 | 39 | 436 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
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| 2.48e-183 | 50 | 447 | 34 | 431 | Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaX PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.001065 | 0.998923 | CS pos: 19-20. Pr: 0.9375 |