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CAZyme Information: APA09342.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA09342.1 | |||||||||||
| CAZy Family | GH17 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 22 | 619 | 2.2e-143 | 0.9964788732394366 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 2.50e-99 | 21 | 622 | 5 | 538 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 1.87e-81 | 22 | 617 | 4 | 531 | choline dehydrogenase; Validated |
| 215420 | PLN02785 | 2.91e-43 | 2 | 609 | 28 | 568 | Protein HOTHEAD |
| 398739 | GMC_oxred_C | 1.71e-38 | 465 | 613 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 366272 | GMC_oxred_N | 1.83e-31 | 94 | 339 | 14 | 217 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 625 | 1 | 625 | |
| 3.68e-237 | 5 | 617 | 3 | 598 | |
| 3.95e-184 | 91 | 617 | 1 | 513 | |
| 3.95e-184 | 91 | 617 | 1 | 513 | |
| 1.23e-132 | 11 | 618 | 4 | 585 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.37e-54 | 21 | 621 | 5 | 564 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 1.89e-54 | 22 | 621 | 6 | 564 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 4.98e-54 | 22 | 621 | 6 | 564 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 4.98e-54 | 22 | 621 | 6 | 564 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 6.43e-54 | 22 | 621 | 82 | 640 | Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.48e-61 | 22 | 617 | 34 | 611 | Dehydrogenase str4 OS=Strobilurus tenacellus OX=41251 GN=str4 PE=1 SV=1 |
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| 6.31e-61 | 24 | 621 | 5 | 531 | L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1 |
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| 1.79e-58 | 21 | 617 | 2 | 533 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1 |
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| 7.94e-57 | 21 | 617 | 3 | 532 | Oxygen-dependent choline dehydrogenase OS=Paraburkholderia xenovorans (strain LB400) OX=266265 GN=betA PE=3 SV=1 |
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| 2.11e-56 | 21 | 617 | 3 | 532 | Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) OX=398527 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000039 | 0.000008 |