logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: APA08827.1

You are here: Home > Sequence: APA08827.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA08827.1
CAZy Family GH15|CBM20
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
404 CP017817|CGC2 47401.90 8.6499
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in APA08827.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT17 70 378 1.5e-81 0.9894366197183099

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
398414 Glyco_transf_17 9.14e-54 59 348 48 300
Glycosyltransferase family 17. This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumor progression.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.86e-306 1 404 1 404
4.64e-259 1 404 1 404
4.64e-259 1 404 1 404
3.75e-242 1 404 1 404
1.24e-106 74 391 53 351

PDB Hits      help

APA08827.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.12e-08 72 308 191 424
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Homo sapiens OX=9606 GN=MGAT3 PE=1 SV=3
2.82e-08 72 308 195 428
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus OX=10116 GN=Mgat3 PE=1 SV=2
6.59e-08 72 308 195 428
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Mus musculus OX=10090 GN=Mgat3 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000028 0.000019

TMHMM  Annotations      download full data without filtering help

Start End
20 37