You are browsing environment: FUNGIDB
CAZyme Information: APA08815.1
You are here: Home > Sequence: APA08815.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA08815.1 | |||||||||||
| CAZy Family | GT90 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 283371 | Raffinose_syn | 6.25e-51 | 363 | 844 | 199 | 724 | Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C. |
| 166325 | PLN02684 | 3.70e-50 | 363 | 844 | 202 | 708 | Probable galactinol--sucrose galactosyltransferase |
| 215203 | PLN02355 | 8.95e-46 | 360 | 844 | 203 | 717 | probable galactinol--sucrose galactosyltransferase 1 |
| 165863 | PLN02219 | 4.13e-43 | 352 | 668 | 190 | 525 | probable galactinol--sucrose galactosyltransferase 2 |
| 215381 | PLN02711 | 9.52e-36 | 363 | 855 | 213 | 760 | Probable galactinol--sucrose galactosyltransferase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 907 | 1 | 907 | |
| 0.0 | 1 | 907 | 1 | 908 | |
| 0.0 | 1 | 907 | 1 | 908 | |
| 0.0 | 1 | 907 | 1 | 932 | |
| 0.0 | 15 | 901 | 10 | 900 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.41e-45 | 193 | 844 | 31 | 707 | Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2 |
|
| 4.22e-38 | 234 | 816 | 75 | 682 | Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 |
|
| 1.19e-37 | 286 | 841 | 124 | 710 | Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1 |
|
| 7.57e-31 | 363 | 668 | 222 | 561 | Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=RFS5 PE=1 SV=1 |
|
| 2.03e-28 | 363 | 844 | 225 | 744 | Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=RFS PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000035 | 0.000000 |