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CAZyme Information: APA07880.1

You are here: Home > Sequence: APA07880.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA07880.1
CAZy Family GH106
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
468 CP017816|CGC15 49212.42 4.7015
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in APA07880.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 127 258 1.5e-21 0.39933993399339934

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226609 ManB2 2.70e-11 140 298 179 340
Beta-mannanase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.25e-263 1 375 1 375
2.72e-205 3 373 52 425
9.43e-185 3 321 5 320
3.82e-158 3 318 5 319
1.41e-125 26 372 20 347

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.45e-06 123 309 140 320
Structure of Bacillus subtilis mannanase man26 [Bacillus subtilis]
7.85e-06 123 309 149 329
Chain A, YdhT protein [Bacillus subtilis],3CBW_B Chain B, YdhT protein [Bacillus subtilis]

Swiss-Prot Hits      help

APA07880.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001136 0.998832 CS pos: 29-30. Pr: 0.6069

TMHMM  Annotations      help

There is no transmembrane helices in APA07880.1.