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CAZyme Information: APA07792.1

You are here: Home > Sequence: APA07792.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA07792.1
CAZy Family GH10
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
503 54353.65 4.3261
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.22:15

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 126 411 4.8e-75 0.9781659388646288

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
269893 GH27 3.52e-132 30 321 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
166449 PLN02808 5.95e-106 22 410 24 359
alpha-galactosidase
177874 PLN02229 4.49e-105 17 408 50 390
alpha-galactosidase
178295 PLN02692 4.73e-104 1 417 20 396
alpha-galactosidase
374582 Melibiase_2 8.29e-84 29 321 1 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 503 1 503
0.0 1 503 1 502
0.0 1 503 1 502
0.0 1 503 1 502
0.0 1 503 1 502

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.62e-170 10 492 6 469
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRL_A Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae]
5.88e-169 10 492 6 469
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_B Chain B, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_C Chain C, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_D Chain D, Alpha-galactosidase 1 [Saccharomyces cerevisiae]
2.60e-139 23 411 2 367
Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]
2.95e-86 22 410 1 336
Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana]
4.03e-86 24 426 3 350
Chain A, alpha-galactosidase [Oryza sativa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.71e-178 7 492 6 468
Alpha-galactosidase OS=Lachancea cidri OX=29831 GN=MEL PE=3 SV=1
2.31e-173 6 491 6 468
Alpha-galactosidase OS=Saccharomyces pastorianus (strain ATCC 76529 / Carlsberg bottom yeast no.1 / CBS 1513 / CLIB 176 / NBRC 1167 / NCYC 396 / NRRL Y-12693) OX=1073566 GN=MEL PE=3 SV=1
2.66e-172 10 492 6 469
Alpha-galactosidase 2 OS=Saccharomyces cerevisiae OX=4932 GN=MEL2 PE=3 SV=1
4.32e-171 24 491 24 468
Alpha-galactosidase OS=Saccharomyces paradoxus OX=27291 GN=MEL PE=3 SV=1
6.13e-171 16 491 16 468
Alpha-galactosidase OS=Saccharomyces mikatae OX=114525 GN=MEL PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.004595 0.995392 CS pos: 21-22. Pr: 0.8755

TMHMM  Annotations      help

There is no transmembrane helices in APA07792.1.