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CAZyme Information: APA07091.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA07091.1 | |||||||||||
| CAZy Family | CBM87|CE18 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.67:7 | 3.2.1.-:2 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 102 | 438 | 5.5e-69 | 0.8923076923076924 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.05e-38 | 109 | 435 | 17 | 315 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 2.73e-24 | 111 | 436 | 106 | 390 | polygalacturonase |
| 215426 | PLN02793 | 1.15e-23 | 115 | 420 | 114 | 394 | Probable polygalacturonase |
| 215120 | PLN02188 | 1.64e-22 | 72 | 441 | 50 | 396 | polygalacturonase/glycoside hydrolase family protein |
| 178580 | PLN03003 | 1.00e-20 | 156 | 435 | 119 | 375 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 445 | 1 | 445 | |
| 1.13e-289 | 1 | 444 | 1 | 444 | |
| 8.88e-274 | 1 | 445 | 1 | 439 | |
| 2.51e-224 | 1 | 354 | 1 | 354 | |
| 1.73e-213 | 116 | 403 | 1 | 288 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.48e-72 | 61 | 444 | 16 | 382 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 4.32e-24 | 78 | 396 | 11 | 311 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 8.41e-19 | 74 | 444 | 15 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.14e-18 | 74 | 444 | 15 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.90e-18 | 74 | 321 | 7 | 237 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.53e-139 | 45 | 444 | 36 | 436 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
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| 1.89e-137 | 56 | 444 | 44 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2 |
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| 1.89e-137 | 56 | 444 | 44 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2 |
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| 4.05e-137 | 40 | 444 | 32 | 431 | Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1 |
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| 1.52e-136 | 56 | 444 | 44 | 431 | Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.260305 | 0.739672 | CS pos: 25-26. Pr: 0.6524 |