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CAZyme Information: APA06881.1

You are here: Home > Sequence: APA06881.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA06881.1
CAZy Family CBM48
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
760 82210.35 5.0064
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.5.1.-:2 3.5.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE18 322 688 9e-198 0.9918256130790191
CBM87 101 319 4e-111 0.9954128440366973

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396211 Polysacc_deac_1 0.001 460 526 63 122
Polysaccharide deacetylase. This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase. It also includes chitin deacetylase from yeast, and endoxylanases which hydrolyzes glucosidic bonds in xylan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 760 1 760
0.0 1 759 1 759
0.0 1 759 1 759
0.0 1 759 1 759
0.0 3 759 2 758

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.23e-288 94 757 23 682
Crystal structure of Agd3 a novel carbohydrate deacetylase [Aspergillus fumigatus Af293]

Swiss-Prot Hits      help

APA06881.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.121591 0.878392 CS pos: 23-24. Pr: 0.8032

TMHMM  Annotations      help

There is no transmembrane helices in APA06881.1.