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CAZyme Information: APA06880.1

You are here: Home > Sequence: APA06880.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sclerotinia sclerotiorum
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum
CAZyme ID APA06880.1
CAZy Family CBM24|CBM24
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
338 37477.40 5.0107
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ssclerotiorum1980UF-70 11368 665079 238 11130
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in APA06880.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH114 101 296 7.9e-69 0.9947368421052631

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397552 Glyco_hydro_114 4.98e-103 100 332 1 220
Glycoside-hydrolase family GH114. This family is recognized as a glycosyl-hydrolase family, number 114. It is endo-alpha-1,4-polygalactosaminidase, a rare enzyme. It is proposed to be TIM-barrel, the most common structure amongst the catalytic domains of glycosyl-hydrolases.
226386 COG3868 2.92e-21 121 296 83 266
Predicted glycosyl hydrolase, GH114 family [Carbohydrate transport and metabolism].
225219 COG2342 2.02e-07 136 311 66 266
Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.09e-251 1 338 1 338
1.09e-251 1 338 1 338
1.52e-206 1 338 1 340
1.52e-206 1 338 1 340
2.64e-201 1 338 54 392

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.23e-78 88 338 31 277
Crystal Structure of Aspergillus fumigatus Ega3 [Aspergillus fumigatus Af293]
3.82e-78 88 338 48 294
Crystal Structure of Aspergillus fumigatus Ega3 complex with galactosamine [Aspergillus fumigatus Af293]

Swiss-Prot Hits      help

APA06880.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999990 0.000021

TMHMM  Annotations      download full data without filtering help

Start End
42 64