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CAZyme Information: APA06822.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA06822.1 | |||||||||||
| CAZy Family | AA9 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 58 | 401 | 2.9e-62 | 0.9784615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.13e-41 | 69 | 400 | 9 | 317 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 6.22e-28 | 46 | 375 | 62 | 384 | Probable polygalacturonase |
| 177865 | PLN02218 | 6.70e-27 | 46 | 375 | 77 | 398 | polygalacturonase ADPG |
| 215540 | PLN03010 | 1.88e-24 | 46 | 375 | 56 | 364 | polygalacturonase |
| 215120 | PLN02188 | 1.84e-23 | 46 | 375 | 46 | 364 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.68e-296 | 1 | 412 | 1 | 412 | |
| 2.15e-252 | 5 | 412 | 5 | 412 | |
| 2.15e-252 | 5 | 412 | 5 | 412 | |
| 6.59e-217 | 1 | 412 | 1 | 413 | |
| 1.04e-149 | 20 | 412 | 18 | 406 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.73e-151 | 33 | 412 | 12 | 388 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 6.80e-27 | 36 | 406 | 7 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 6.80e-27 | 36 | 406 | 7 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.96e-25 | 69 | 406 | 26 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.65e-23 | 50 | 328 | 5 | 278 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.84e-150 | 20 | 412 | 18 | 406 | Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis OX=5068 GN=xghA PE=1 SV=1 |
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| 3.70e-150 | 7 | 412 | 2 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xghA PE=3 SV=1 |
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| 6.49e-141 | 5 | 412 | 4 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xghA PE=3 SV=1 |
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| 2.60e-135 | 14 | 412 | 12 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=xghA PE=3 SV=2 |
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| 3.68e-135 | 14 | 412 | 12 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=xghA PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000323 | 0.999661 | CS pos: 20-21. Pr: 0.9839 |