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CAZyme Information: APA06150.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sclerotinia sclerotiorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum | |||||||||||
| CAZyme ID | APA06150.1 | |||||||||||
| CAZy Family | AA6 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL7 | 58 | 273 | 1.3e-91 | 0.9953271028037384 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 400923 | Alginate_lyase2 | 2.49e-51 | 58 | 273 | 1 | 222 | Alginate lyase. Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of pfam05426. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.71e-194 | 1 | 273 | 1 | 273 | |
| 6.10e-167 | 1 | 273 | 1 | 286 | |
| 2.33e-165 | 1 | 273 | 1 | 280 | |
| 1.35e-148 | 1 | 273 | 1 | 264 | |
| 1.02e-106 | 48 | 273 | 21 | 254 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.73e-62 | 48 | 273 | 3 | 231 | Chain A, Glucuronan lyase [Trichoderma parareesei] |
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| 2.65e-18 | 50 | 273 | 2 | 227 | Crystal structure at 1.0 A of alginate lyase A1-II', a member of polysaccharide lyase family-7 [Sphingomonas sp. A1],2Z42_A Crystal Structure of Family 7 Alginate Lyase A1-II' from Sphingomonas sp. A1 [Sphingomonas sp.] |
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| 9.56e-18 | 50 | 273 | 1 | 226 | Chain A, Alginate lyase [Sphingomonas sp. A1],2ZAC_A Chain A, Alginate lyase [Sphingomonas sp. A1] |
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| 6.67e-17 | 50 | 273 | 1 | 226 | Chain A, Alginate lyase [unidentified] |
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| 9.22e-17 | 50 | 273 | 1 | 226 | Chain A, Alginate lyase [Sphingomonas sp. A1] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000228 | 0.999744 | CS pos: 22-23. Pr: 0.9835 |