You are browsing environment: FUNGIDB
CAZyme Information: AO090038000552-T-p1
You are here: Home > Sequence: AO090038000552-T-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus oryzae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus oryzae | |||||||||||
| CAZyme ID | AO090038000552-T-p1 | |||||||||||
| CAZy Family | GH7 | |||||||||||
| CAZyme Description | Ortholog(s) have rhamnogalacturonan alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide lyase activity and role in pectin catabolic process | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 67 | 372 | 7.8e-56 | 0.9476923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215540 | PLN03010 | 1.89e-25 | 41 | 372 | 48 | 388 | polygalacturonase |
| 395231 | Glyco_hydro_28 | 2.20e-23 | 147 | 372 | 85 | 314 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 5.24e-23 | 41 | 354 | 69 | 404 | polygalacturonase ADPG |
| 215120 | PLN02188 | 2.36e-20 | 41 | 372 | 38 | 389 | polygalacturonase/glycoside hydrolase family protein |
| 165802 | PLN02155 | 3.04e-19 | 41 | 375 | 29 | 380 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 467 | 1 | 467 | |
| 0.0 | 1 | 467 | 1 | 467 | |
| 0.0 | 1 | 467 | 1 | 467 | |
| 0.0 | 1 | 467 | 1 | 467 | |
| 0.0 | 1 | 467 | 1 | 467 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.17e-223 | 20 | 442 | 1 | 422 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 0.0 | 1 | 467 | 1 | 467 | Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1 |
|
| 0.0 | 1 | 467 | 1 | 467 | Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1 |
|
| 5.76e-260 | 9 | 460 | 7 | 459 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
|
| 2.47e-239 | 1 | 444 | 1 | 443 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
|
| 2.73e-236 | 1 | 444 | 1 | 443 | Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000227 | 0.999730 | CS pos: 19-20. Pr: 0.9807 |