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CAZyme Information: AO090012000749-T-p1

You are here: Home > Sequence: AO090012000749-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus oryzae
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus oryzae
CAZyme ID AO090012000749-T-p1
CAZy Family GH28
CAZyme Description Ortholog(s) have pectinesterase activity and role in pectin catabolic process
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
331 Chr4_A_oryzae_RIB40|CGC21 35458.96 4.2801
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AoryzaeRIB40 12364 510516 274 12090
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:8

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 28 309 3e-81 0.9444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 8.25e-51 28 296 2 266
Pectinesterase.
178346 PLN02745 2.42e-43 16 299 275 554
Putative pectinesterase/pectinesterase inhibitor
177947 PLN02313 4.35e-40 22 296 272 541
Pectinesterase/pectinesterase inhibitor
215179 PLN02314 1.52e-39 24 321 276 574
pectinesterase
178113 PLN02497 4.78e-39 1 331 6 321
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.73e-238 1 331 1 331
3.89e-237 1 331 1 331
3.89e-237 1 331 1 331
3.89e-237 1 331 1 331
3.19e-236 1 331 1 331

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.74e-69 19 329 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5.28e-69 19 329 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.05e-34 28 296 10 273
Pectin methylesterase from Carrot [Daucus carota]
5.55e-27 25 331 3 313
Chain A, Pectinesterase 1 [Solanum lycopersicum]
8.83e-13 34 296 45 366
The structure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.94e-189 1 331 1 331
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
4.18e-163 1 329 1 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.43e-71 20 329 28 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
1.14e-70 19 329 27 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.14e-70 19 329 27 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000370 0.999580 CS pos: 17-18. Pr: 0.9739

TMHMM  Annotations      help

There is no transmembrane helices in AO090012000749-T-p1.