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CAZyme Information: AO090005001400-T-p1

You are here: Home > Sequence: AO090005001400-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus oryzae
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus oryzae
CAZyme ID AO090005001400-T-p1
CAZy Family CE8
CAZyme Description Ortholog(s) have hydrolase activity, acting on glycosyl bonds activity and role in carbohydrate catabolic process
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 Chr1_A_oryzae_RIB40|CGC17 47626.10 5.1964
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AoryzaeRIB40 12364 510516 274 12090
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 60 418 8.7e-47 0.9507692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.41e-27 103 362 30 293
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 3.31e-22 77 436 101 409
polygalacturonase
177865 PLN02218 2.86e-21 42 367 78 398
polygalacturonase ADPG
215426 PLN02793 2.62e-18 189 432 211 428
Probable polygalacturonase
178580 PLN03003 2.75e-15 42 367 34 347
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 437 1 437
0.0 1 437 1 437
0.0 1 437 1 437
0.0 1 437 1 437
0.0 1 437 1 437

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.13e-14 44 377 28 366
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
3.02e-12 135 363 81 322
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 437 1 437
Probable exopolygalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxC PE=3 SV=1
0.0 1 437 1 437
Probable exopolygalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxC PE=3 SV=1
2.26e-254 3 436 3 427
Probable exopolygalacturonase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxC PE=3 SV=1
3.06e-247 1 435 1 436
Probable exopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxC PE=3 SV=2
3.06e-247 1 435 1 436
Exopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgxC PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000262 0.999727 CS pos: 21-22. Pr: 0.9804

TMHMM  Annotations      help

There is no transmembrane helices in AO090005001400-T-p1.