logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: AO090005000067-T-p1

You are here: Home > Sequence: AO090005000067-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus oryzae
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus oryzae
CAZyme ID AO090005000067-T-p1
CAZy Family AA7
CAZyme Description Has domain(s) with predicted polygalacturonase activity and role in carbohydrate metabolic process
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
554 Chr1_A_oryzae_RIB40|CGC6 59118.43 4.4007
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AoryzaeRIB40 12364 510516 274 12090
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.171:11

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 65 372 7.3e-51 0.9538461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215540 PLN03010 7.29e-21 40 387 48 401
polygalacturonase
165802 PLN02155 6.79e-15 31 374 20 380
polygalacturonase
395231 Glyco_hydro_28 5.70e-14 147 370 86 313
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 1.89e-13 149 400 180 437
Probable polygalacturonase
178580 PLN03003 6.23e-10 40 364 25 364
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 554 1 554
0.0 1 554 1 554
0.0 1 554 1 554
0.0 1 554 1 554
0.0 1 536 1 536

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.93e-198 19 441 1 422
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
5.96e-13 46 375 23 377
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.13e-215 4 446 3 445
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
5.53e-214 10 451 13 455
Probable rhamnogalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgB PE=3 SV=1
7.85e-214 10 451 13 455
Rhamnogalacturonase B OS=Aspergillus niger OX=5061 GN=rhgB PE=1 SV=1
2.12e-210 1 446 1 446
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
3.17e-210 6 446 9 449
Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000239 0.999734 CS pos: 18-19. Pr: 0.9707

TMHMM  Annotations      help

There is no transmembrane helices in AO090005000067-T-p1.