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CAZyme Information: AN9045-T-p1

You are here: Home > Sequence: AN9045-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus nidulans
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus nidulans
CAZyme ID AN9045-T-p1
CAZy Family GT39
CAZyme Description Protein with polygalacturonase activity, involved in degradation of pectin
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
449 ChrVII_A_nidulans_FGSC_A4|CGC5 49161.18 5.7256
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnidulansFGSCA4 10988 227321 276 10712
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 83 437 1.4e-70 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 5.46e-45 144 433 49 314
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 1.68e-27 154 440 145 395
polygalacturonase
178580 PLN03003 2.98e-26 154 431 119 372
Probable polygalacturonase At3g15720
215120 PLN02188 8.02e-26 224 425 197 380
polygalacturonase/glycoside hydrolase family protein
215426 PLN02793 2.32e-23 149 431 144 406
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 449 1 449
0.0 1 449 1 449
1.43e-288 12 449 7 443
8.53e-179 33 407 25 384
1.03e-159 34 444 26 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.91e-54 39 446 2 382
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
1.64e-24 145 423 75 330
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.06e-24 145 423 75 330
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
9.42e-24 145 423 67 322
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
5.34e-23 145 433 68 342
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 449 1 449
Exopolygalacturonase X-2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-2 PE=2 SV=1
2.80e-133 41 441 34 429
Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaX PE=3 SV=1
2.75e-130 41 441 34 429
Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2
5.89e-130 41 441 34 429
Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1
1.11e-129 41 441 34 429
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000213 0.999754 CS pos: 24-25. Pr: 0.9782

TMHMM  Annotations      help

There is no transmembrane helices in AN9045-T-p1.