CAZyme Information: AMAG_06673-t26_1-p1

Basic Information

• Species: Allomyces macrogynus
• Lineage: Blastocladiomycota; Blastocladiomycetes; ; Blastocladiaceae; Allomyces; Allomyces macrogynus
• CAZyme ID: AMAG_06673-t26_1-p1
• CAZy Family: GH18
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
705	GG745337|CGC1	75576.50	8.2459

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AmacrogynusATCC38327	19333	578462	535	18798

• Gene Location: location=GG745337:269763-272049(+)

Full Sequence      

MPRSADDFLARMLVGEVPRPPTERELAALGAALDTIVAPVPDAHDVPEPLRSLRGTDVVR
PDEALELLRQRTGPGAFRKFMMLLSLLAKPNGTWLLSGGKFNKAFPDMSLEERVQMMLNC
QNSAKLQDRTMFVLFKGIADFLVYSNPTGRMPAQLYDVLGYPGPDPDRPKSLPSNAVPHF
RFIDVPAAEANRAMPLTMKFDAVVVGSGAGGGVTAATLARAGMRVVVLERGQWHKPEDLP
LKEFDTFAAMYDRGGMTSSEDASISLLAGNTVGGGTTINWAASLRPQVYLRDEWSKKHGL
PWFGSEGFQKAIDAVCDRLGVGSAAIKQNSTNSIILEGCKKLGMHAAEIPQNTRNQPHEC
GYCGMGCSRALKQSSALTWLADATKDGAQIIQSCHVDKILMSDDKKVARGVQAVVGPNKI
PIIIEAPTVVVSGGSIHTPALLLRSGLKNPNIGRHLGLHPVCVVLGYYHESTKPYSGSMM
TAVSNAVENRDGKHYGAKIEATTLHPVVHAAQSAWANPADNKRQLAQLDHGACMVVLTRD
RDRNARIILDDDGSPVVQFAISEFDGASAAEGMARAAQILITTGAHTVVTGQRNVPAFKP
PSTDIGDPKAVAFIDEIRAKGVHTLQTGLFSAHQMGTARMATTPARGVTNPRGQVWGTQG
LYVADASLFPTSSGVNPMITAYSVAYSVAHWIVEDVKGKDSGANM

Enzyme Prediction     

No EC number prediction in AMAG_06673-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	196	697	1.1e-53	0.511326860841424

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
366272	GMC_oxred_N	8.14e-62	247	461	1	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
225186	BetA	3.50e-38	218	695	26	536	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739	GMC_oxred_C	4.65e-27	550	686	13	141	GMC oxidoreductase. This domain found associated with pfam00732.
235000	PRK02106	3.39e-05	633	671	473	510	choline dehydrogenase; Validated
235000	PRK02106	8.81e-05	390	461	218	286	choline dehydrogenase; Validated

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UPK96886.1|AA3	2.38e-105	105	696	139	734
APA10116.1|AA3_2	9.87e-06	191	695	30	639

PDB Hits     

AMAG_06673-t26_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q94BP3|FAO4B_ARATH	1.80e-89	62	699	69	745	Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2
sp|O65709|FAO4A_ARATH	1.18e-87	196	699	220	725	Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2
sp|B5WWZ8|FAO1_LOTJA	1.41e-86	61	697	73	745	Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1
sp|Q9ZWB9|FAO1_ARATH	3.39e-84	22	697	29	753	Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana OX=3702 GN=FAO1 PE=3 SV=2
sp|B5WWZ9|FAO2_LOTJA	5.70e-81	55	697	69	747	Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000052	0.000001

TMHMM  Annotations     

There is no transmembrane helices in AMAG_06673-t26_1-p1.