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CAZyme Information: AMAG_06266-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Allomyces macrogynus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Blastocladiomycota; Blastocladiomycetes; ; Blastocladiaceae; Allomyces; Allomyces macrogynus | |||||||||||
| CAZyme ID | AMAG_06266-t26_1-p1 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH18 | 90 | 452 | 7.2e-23 | 0.9527027027027027 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 119365 | GH18_chitinase | 1.67e-23 | 91 | 446 | 1 | 322 | The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. |
| 214753 | Glyco_18 | 4.10e-20 | 90 | 446 | 1 | 334 | Glyco_18 domain. |
| 225862 | ChiA | 4.23e-18 | 74 | 450 | 23 | 427 | Chitinase, GH18 family [Carbohydrate transport and metabolism]. |
| 395573 | Glyco_hydro_18 | 6.08e-15 | 90 | 446 | 1 | 307 | Glycosyl hydrolases family 18. |
| 119358 | GH18_plant_chitinase_class_V | 3.81e-05 | 90 | 355 | 3 | 240 | The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.94e-16 | 87 | 446 | 236 | 597 | |
| 8.81e-15 | 58 | 450 | 10 | 439 | |
| 8.94e-15 | 90 | 450 | 41 | 438 | |
| 1.70e-14 | 82 | 453 | 34 | 442 | |
| 2.74e-14 | 73 | 450 | 26 | 440 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.77e-12 | 130 | 446 | 110 | 448 | Chitinase ChiA74 from Bacillus thuringiensis [Bacillus thuringiensis],6BT9_B Chitinase ChiA74 from Bacillus thuringiensis [Bacillus thuringiensis] |
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| 6.97e-11 | 134 | 371 | 71 | 291 | The crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea [Clonostachys rosea],3G6M_A crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea in complex with a potent inhibitor caffeine [Clonostachys rosea] |
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| 9.39e-10 | 159 | 446 | 107 | 383 | Structure of Chitinase 42 from Trichoderma harzianum [Trichoderma harzianum] |
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| 3.80e-09 | 159 | 446 | 107 | 383 | Chain A, Endochitinase 42 [Trichoderma harzianum],6YN4_A Chain A, Endochitinase 42 [Trichoderma harzianum],7AKQ_A Chain A, Endochitinase 42 [Trichoderma harzianum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.12e-08 | 159 | 446 | 107 | 383 | Endochitinase 42 OS=Trichoderma harzianum OX=5544 GN=chit42 PE=1 SV=1 |
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| 1.51e-08 | 163 | 446 | 112 | 390 | Endochitinase 46 OS=Trichoderma harzianum OX=5544 GN=chit46 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.998866 | 0.001161 |
