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CAZyme Information: AMAG_02762-t26_1-p1

You are here: Home > Sequence: AMAG_02762-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Allomyces macrogynus
Lineage Blastocladiomycota; Blastocladiomycetes; ; Blastocladiaceae; Allomyces; Allomyces macrogynus
CAZyme ID AMAG_02762-t26_1-p1
CAZy Family CE4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1112 115314.80 7.0410
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AmacrogynusATCC38327 19333 578462 535 18798
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in AMAG_02762-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 25 387 5.2e-22 0.9527027027027027

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
119365 GH18_chitinase 1.11e-21 26 381 1 322
The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
225862 ChiA 1.46e-19 16 381 30 423
Chitinase, GH18 family [Carbohydrate transport and metabolism].
214753 Glyco_18 9.62e-19 25 381 1 334
Glyco_18 domain.
395573 Glyco_hydro_18 2.69e-13 25 381 1 307
Glycosyl hydrolases family 18.
119358 GH18_plant_chitinase_class_V 1.81e-05 25 290 3 240
The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.43e-17 22 317 236 524
4.24e-15 16 381 65 431
1.69e-14 25 346 189 501
1.72e-14 20 309 110 399
2.94e-14 25 384 34 394

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.49e-12 65 309 110 357
Chitinase ChiA74 from Bacillus thuringiensis [Bacillus thuringiensis],6BT9_B Chitinase ChiA74 from Bacillus thuringiensis [Bacillus thuringiensis]
3.74e-08 94 305 107 307
Structure of Chitinase 42 from Trichoderma harzianum [Trichoderma harzianum]
1.51e-07 94 305 107 307
Chain A, Endochitinase 42 [Trichoderma harzianum],6YN4_A Chain A, Endochitinase 42 [Trichoderma harzianum],7AKQ_A Chain A, Endochitinase 42 [Trichoderma harzianum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.44e-08 98 315 112 330
Endochitinase 46 OS=Trichoderma harzianum OX=5544 GN=chit46 PE=1 SV=1
4.44e-07 94 305 107 307
Endochitinase 42 OS=Trichoderma harzianum OX=5544 GN=chit42 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000318 0.999652 CS pos: 20-21. Pr: 0.9793

TMHMM  Annotations      download full data without filtering help

Start End
2 24