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CAZyme Information: ALNC14_132290:RNA-p1

You are here: Home > Sequence: ALNC14_132290:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo laibachii
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
CAZyme ID ALNC14_132290:RNA-p1
CAZy Family GT60
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2278 256799.49 6.6776
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AlaibachiiNc14 14629 890382 180 14449
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 72 318 2.8e-59 0.9722222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 1.69e-127 1 704 6 742
Probable beta-xylosidase; Provisional
185053 PRK15098 1.45e-87 1 713 1 734
beta-glucosidase BglX.
224389 BglX 3.10e-58 73 413 55 363
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
396478 Glyco_hydro_3_C 4.97e-51 389 619 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747 Glyco_hydro_3 1.84e-39 58 351 46 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 2278 1 2278
9.49e-263 121 739 1 626
1.13e-131 30 747 30 755
2.09e-131 30 729 29 738
1.26e-124 25 731 32 768

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.78e-115 37 747 16 735
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
8.18e-115 37 747 16 735
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
1.44e-93 30 746 36 756
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
2.88e-91 27 745 32 757
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
2.95e-91 27 745 32 757
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.49e-117 37 743 43 742
Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=bxlB PE=3 SV=1
4.19e-115 14 746 20 759
Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnD PE=3 SV=1
8.79e-114 30 746 36 759
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=bxlB PE=3 SV=1
8.79e-114 30 746 36 759
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=bxlB PE=3 SV=1
4.49e-110 21 707 40 748
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000248 0.999731 CS pos: 26-27. Pr: 0.9589

TMHMM  Annotations      help

There is no transmembrane helices in ALNC14_132290:RNA-p1.