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CAZyme Information: ALNC14_120280:RNA-p1

You are here: Home > Sequence: ALNC14_120280:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo laibachii
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
CAZyme ID ALNC14_120280:RNA-p1
CAZy Family GT48
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
471 53353.03 6.5979
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AlaibachiiNc14 14629 890382 180 14449
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ALNC14_120280:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT71 79 373 1.7e-44 0.9734848484848485

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
402574 Mannosyl_trans3 5.69e-14 96 376 18 272
Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 471 1 471
1.56e-84 66 427 25 391
3.60e-80 73 466 106 498
3.06e-71 73 464 138 523
1.35e-51 73 457 142 488

PDB Hits      help

ALNC14_120280:RNA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.30e-07 77 368 233 497
Alpha-1,3-mannosyltransferase MNT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNT3 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.373856 0.626133 CS pos: 24-25. Pr: 0.6037

TMHMM  Annotations      help

There is no transmembrane helices in ALNC14_120280:RNA-p1.