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CAZyme Information: ALNC14_085640:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Albugo laibachii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii | |||||||||||
| CAZyme ID | ALNC14_085640:RNA-p1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 2.4.1.34:28 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT48 | 1109 | 1832 | 2e-279 | 0.9539918809201624 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396784 | Glucan_synthase | 0.0 | 1109 | 1874 | 3 | 818 | 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
| 405046 | FKS1_dom1 | 1.98e-32 | 240 | 333 | 3 | 106 | 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 2019 | 1 | 2019 | |
| 0.0 | 13 | 2019 | 12 | 2023 | |
| 0.0 | 10 | 2019 | 2038 | 4070 | |
| 1.14e-275 | 136 | 1825 | 61 | 1581 | |
| 9.94e-274 | 136 | 2002 | 84 | 1760 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.34e-246 | 141 | 1998 | 239 | 1917 | Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1 |
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| 4.29e-244 | 141 | 1996 | 232 | 1936 | Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3 |
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| 2.23e-243 | 141 | 1996 | 232 | 1936 | Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2 |
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| 2.65e-243 | 117 | 1998 | 224 | 1922 | Callose synthase 7 OS=Arabidopsis thaliana OX=3702 GN=CALS7 PE=3 SV=3 |
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| 4.82e-242 | 141 | 1996 | 236 | 1941 | Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000053 | 0.000002 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 375 | 397 |
| 588 | 610 |
| 630 | 652 |
| 678 | 700 |
| 705 | 727 |
| 1403 | 1425 |
| 1537 | 1559 |
| 1588 | 1607 |
| 1614 | 1636 |
| 1682 | 1704 |
| 1740 | 1762 |
| 1852 | 1874 |
| 1894 | 1913 |
| 1917 | 1936 |
| 1956 | 1978 |