CAZyme Information: ALNC14_069610:RNA-p1

Basic Information

• Species: Albugo laibachii
• Lineage: Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
• CAZyme ID: ALNC14_069610:RNA-p1
• CAZy Family: GH37
• CAZyme Description: conserved hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
926		106018.91	5.0168

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AlaibachiiNc14	14629	890382	180	14449

• Gene Location: location=FR824149:36949-39729(-)

Full Sequence      

MEETDAITLYPPVVQSTREELEETEQKHESGNEHEDDTLMSNDDDSMSCSSSIEYYSEEM
DADNVFNTKYPSNDLKQPTMQLTTQALQFTSDAGNSPKPTTRTLPTKPTYFPTTPYSESE
SEKPDLFSDANQLTESFGFYIFPAPDDPDLAPPHIDTLPDQNGTHRRAHNDEMWLCAQFA
PAMLKWRTGKAWTQMANTSFTKDICNLSSMIMHPVGSTDQYTTCKNHQVPGNSMENATST
PKFSKSQLTPLVMWASRRSHYQDARGYLLTVARNEVVGFHLCVRSNREFLVTTDSSNWFA
AQGHIPRARVAIDESLLSPSLEMEIFLVKSVEMDDGSSMMEYLEPLGASSLTQSTREHVL
YIRIRIGSSVAENLYKIPIRIFTQAKGFQDEQITWSSTIRLNVCNVILSNPSQYKFHLDL
WQHFSSLARAHQTLLWSDNHFEVMTRYLSKLSELGQKCVSVVATEMPWAGQQCYLETTYP
SALYEHAILQVYEETLPNFTETETLNEPSSQICMDFSHFDRLLALAQQFHMDTVEVFGLF
AIWQDTAHGFTGPVSGQTCQKPDKIPFPARTRVNCPEMDVSLTPSRVGTLEIDVEPPLAP
LDGWRIRCFTKQTQSFRYLRDLRDIERFITLFYEHCVELSIIDKVRICADEPSNVELFLA
QMEFIQRLAPKFKYKVAINHFDFLHVAPPQVVDYVPILPLACRDLEITGRTLEAIHAKGG
KLCWYVCCGPAYPNQFVSSPLVEGELIGYLTYFLHLDGFLRWNFCLWPNDPWHNLRWRSP
AWKVGDMYFVLPGHDGRPIETLRFESLRFAVQAYELLVMAEEILLASCMEQLKQQVAQLI
FRTEDFSDFCRLHERHPEELYSLDSMDYQRAKTLILETIANAQRRNPAVLRCPGPHTNIN
VYSGSSHDRLVSPVNRLAALQQENQE

Enzyme Prediction     

EC	-	-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH123	626	836	1.8e-32	0.36988847583643125

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
404238	DUF4091	1.11e-23	755	821	1	66	Domain of unknown function (DUF4091). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length. There is a single completely conserved residue G that may be functionally important.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CCA20818.1|GH123	0.0	1	926	1	926
UIZ24194.1|GH123	5.75e-229	225	882	23	701
AEE96999.1|GH123	7.43e-105	269	883	36	587
AUS09029.1|GH123	6.56e-96	269	870	33	566
UDN50208.1|GH123	5.04e-91	263	879	26	579

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5L7V_A	2.04e-13	399	815	184	511	Chain A, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7V_B Chain B, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482]
5L7R_A	2.10e-13	399	815	199	526	Chain A, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7R_B Chain B, glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7U_A Chain A, Glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],5L7U_B Chain B, Glycoside hydrolase [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits     

ALNC14_069610:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000025	0.000005

TMHMM  Annotations     

There is no transmembrane helices in ALNC14_069610:RNA-p1.