logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: ALNC14_068240:RNA-p1

You are here: Home > Sequence: ALNC14_068240:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo laibachii
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
CAZyme ID ALNC14_068240:RNA-p1
CAZy Family GH37
CAZyme Description putative exo1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
421 47354.60 8.4205
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AlaibachiiNc14 14629 890382 180 14449
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ALNC14_068240:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 131 394 2e-24 0.9747292418772563

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225344 BglC 7.57e-09 135 274 71 213
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.86e-313 1 421 1 421
1.17e-116 50 418 43 397
2.41e-92 37 412 15 374
4.54e-16 135 355 83 320
7.44e-16 135 393 199 466

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.26e-06 134 260 51 177
Chain A, Exo-beta-1,3-glucanase [uncultured bacterium],6ZB9_B Chain B, Exo-beta-1,3-glucanase [uncultured bacterium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.93e-08 135 298 97 264
Glucan 1,3-beta-glucosidase 2 OS=Wickerhamomyces anomalus OX=4927 GN=EXG2 PE=3 SV=1
5.70e-08 137 420 97 397
Probable glucan endo-1,6-beta-glucosidase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=exgB PE=3 SV=1
7.49e-07 127 284 85 245
Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=exgA PE=3 SV=2
9.72e-07 135 269 80 218
Probable glucan 1,3-beta-glucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=exgA PE=3 SV=2
1.25e-06 137 394 97 374
Probable glucan endo-1,6-beta-glucosidase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=exgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.454508 0.545473 CS pos: 24-25. Pr: 0.4883

TMHMM  Annotations      download full data without filtering help

Start End
7 24